Gene Information

Name : Metme_3168 (Metme_3168)
Accession : YP_004514042.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3498822 - 3499040 bp
Length : 219 bp
Strand : +
Note : KEGG: svo:SVI_2530 cold shock domain family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTCTACTACAATGACAACCGGCATCGTTAAATGGTTTAACGCCGACAAAGGCTTTGGTTTTATCGAACAAAAATCCGG
CCCCGATGTTTTCGTACACTTTAAAAACATCCTGGCTACGGGCAACAGCTATAAAACGCTGGATGAAGGACAACAAGTCC
AGTTTAAGCTTGGCCAAGGCCCTAAAGGCCCGCAAGCGGAAGACGTTTCCATCGTCTAA

Protein sequence :
MSTTMTTGIVKWFNADKGFGFIEQKSGPDVFVHFKNILATGNSYKTLDEGQQVQFKLGQGPKGPQAEDVSIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 9e-14 55