Gene Information

Name : Metme_R0016 (Metme_R0016)
Accession : -
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 850441 - 851961 bp
Length : 1521 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence : 
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGTATGCTTAACACATGCAAGTCGAACGGTAGCAGGCCTTCGGGCGC
TGACGAGTGGCGGACGGGTGAGTAATGCATAGGAATCTGCCTATTAGTGGGGGATAACGTGGGGAAACTCACGCTAATAC
CGCATACGACCTACGGGTGAAAGCTGGGGACCTTCGGGCCTGGCGCTAATAGATGAGCCTATGTTGGATTAGCTAGTTGG
TAGGGTAATGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCC
AGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAA
GGCCTGAGGGTTGTAAAGCACTTTCAATAGGAAGGAATACCTATCGGTTAATACCCGGTAGACTGACATTACCTATACAA
GAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGC
GTGCGTAGGCGGTTGTTTAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGATACTGGGCAACTAGAG
TTGAGTAGAGGGGAGTGGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACACCAGTGGCGAAGGCGGCT
CCCTGGACTCAAACTGACGCTGAGGTACGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAA
CGATGTCAACTAACCGTTGGGCGCTTTAAGTGCTTAGTGGTGGAGCTAACGTATTAAGTTGACCGCCTGGGGAGTACGGC
CGCAAGGCTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAG
AACCTTACCTACCCTTGACATCCAGAGAATCTGTTAGAGATAGTAGAGTGCCTTCGGGAACTCTGAGACAGGTGCTGCAT
GGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTATCCTTAGTTGCCAGCGGTT
CGGCCGGGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGG
GTAGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGCAGCAAAACCGCGAGGTCAAGCAAATCCCAGAAAGCCGATC
CTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAATGTCGCGGTGAAT
ACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGTCTAACCTTCGGGA
GGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCCTAGGGGAACCTGGGGCTGGATCACC
T

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-144 88.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-144 88.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-144 88.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-144 88.4
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-260 87.3
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-260 87.3