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Name : clpB (JDM601_0346) Accession : YP_004521600.1 Strain : Mycobacterium sp. JDM601 Genome accession: NC_015576 Putative virulence/resistance : Virulence Product : endopeptidase ATP binding protein (chain B) ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 362684 - 365230 bp Length : 2547 bp Strand : + Note : - DNA sequence : GTGGACTCGTTCAACCCGACCACCAAGACGCAGGCGGCGCTGACCGCGGCGCTGCAGGCGGCGACCGCTGCCGGCAACCC CGAAATCCGGCCGGCACATCTGCTGCAGGCCCTGCTGACCCAGAATGACGGGATCGCCGTGCCGCTGCTGGAGGCGGTCG GTGTGAACCCGGCGACGATCCGCACCGAGAACCAGCACCTGCTGGACCGGTTGCCGCAGGCCAGCGGTGCCAGCGCGCAG CCGCAGCTGTCCCGCGAATCCCTGGCCGCGATCACCGTCGCCCAGCAGCTGGCCACCGAACTCGATGACGAGTACGTCTC CACCGAGCACCTGATGGTGGGCCTGGCCACCGGCGACTCCGACGTCGCCAAGGTACTGACCGGTCACGGCGCGTCCCCGC AGGCGCTGCGGGACGGTTTCGTGAAGGTGCGGGGCAGCGCCCGGGTCACCAACCCCGACCCCGAGGCCAGCTACCAGGCG CTGGAGAAGTACTCCACCGACCTGACCGCCCGGGCTCGCGAGGGCAAGCTCGACCCGGTGATCGGACGCGACACCGAGAT CCGCCGGGTGGTGCAAGTGTTGTCTCGGCGCACCAAGAACAACCCGGTGCTCATCGGTGAGCCGGGCGTCGGCAAGACCG CGATCGTCGAGGGGCTGGCCCAGCGCATCGTGGCCGGCGACGTCCCCGAGAGCCTGCGCGACAAGACCGTGGTCTCGCTG GATCTGGGTTCGATGGTGGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAACGGCTCAAGGCCGTCCTGGACGAGATCAA GAACGCTGCCGGGCAGGTCATCACCTTCATCGACGAGCTGCACACCATCGTCGGCGCGGGCGCCACCGGCGAGGGTGCCA TGGATGCCGGCAACATGATCAAGCCGATGCTGGCCCGCGGCGAGCTGCGGCTGGTCGGCGCGACCACGCTGGAGGAGTAC CGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCAGGTCTACGTCGGCGAACCGTCGGCCGAGGACAC CATCGGCATCTTGCGCGGGCTCAAGGAGCGCTACGAGGTGCACCACGGTGTGCGGATCACCGACTCGGCGCTGGTCGCCG CGGCCACCCTCTCCGACCGCTACATCACCGCGCGTTTCCTGCCGGACAAGGCCATCGACCTGGTCGACGAGGCCGCCTCC CGGCTGCGGATGGAGATCGACTCCCGGCCCGTCGAGATCGACGAGGTCGAGCGGCTGGTGCGTCGGCTCGAGATCGAAGA GATGGCGCTGAGCAAAGAAGAAGACGACGCGTCGGCGGACCGGCTGGAGAAGCTGCGTGCCGAATTGGCCGACTACAAGG AGAAACTGGCCGAGCTGACCGCCAGGTGGCACAACGAGAAGAACGCCATCGACGTCGTCCGCGAGCTCAAGGAGCAGCTG GAAACCCTGCGCGGTGAGTCCGACCGCGCCGAACGCGACGGCGACCTGGCCAAGGCGGCCGAACTGCGCTACGGGCGCAT CCCCGAGGTGGAGAAGAAGCTGGAGGCGGCGCTGCCGAAGGCCGAGGCCCGTGAGCAGGTGATGCTCAAGGAGGAAGTCG GTCCTGACGACATCGCCGACGTGGTGAGCGCCTGGACCGGTATCCCGGCCGGGCGGTTGCTGGAAGGCGAGACCGCCAAG CTGCTGCGGATGGAAGACGAACTCGCCAAGCGGGTCGTCGGGCAGCGCAAGCCGGTGCAAGCGGTCTCCGACGCGGTGCG GCGCAGCCGGGCCGGGGTCGCCGACCCCAACCGGCCGACCGGTTCGTTCCTGTTCCTGGGCCCCACCGGCGTCGGCAAGA CCGAGCTGGCCAAGGCGCTGGCCGACTTCCTCTTCGACGACGAGCGGGCCATGGTCCGCATCGACATGAGCGAGTACGGC GAGAAGCACTCGGTGGCACGGCTGGTCGGGGCGCCCCCCGGCTACATCGGCTACGACCAGGGCGGTCAGCTGACCGAGGC GGTGCGCCGCCGGCCCTACACGGTGGTGCTCTTCGACGAGGTGGAGAAGGCGCACCCGGACGTGTTCGACGTGCTGCTGC AGGTCCTCGACGAGGGCCGGCTCACCGACGGGCAGGGCCGCACCGTCGACTTCCGCAACACCATCCTGATCCTGACCTCC AACCTGGGATCGGGTGGCACCGACGAGGAGGTGATGGCGGCGGTACGGGCGGCGTTCAAGCCGGAGTTCATCAACCGGCT CGACGACGTGCTGATCTTCGAGGGCCTCAACCCCGAGGAACTGGTCCGGATCGTCGACATTCAGCTCGAACAGCTCGACA AGCGGTTGGCGCAGCGCCGGCTGGCACTCGAGGTGTCGTTGCCGGCCAAGAAGTGGCTGGCCGAGCGCGGGTTCGACCCG ATCTACGGTGCCCGGCCGCTGCGCCGGTTGATCCAGCAGGCCATCGGCGACCAGTTGGCCAAGCTGCTGCTGGCCGGCGA GGTGCACGATGGTGACACCGTGCCCGTCAACATCAGTCCCGACGGCGACGCGCTGATCCTGGGCTGA Protein sequence : MDSFNPTTKTQAALTAALQAATAAGNPEIRPAHLLQALLTQNDGIAVPLLEAVGVNPATIRTENQHLLDRLPQASGASAQ PQLSRESLAAITVAQQLATELDDEYVSTEHLMVGLATGDSDVAKVLTGHGASPQALRDGFVKVRGSARVTNPDPEASYQA LEKYSTDLTARAREGKLDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVVSL DLGSMVAGAKYRGEFEERLKAVLDEIKNAAGQVITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLEEY RKYIEKDAALERRFQQVYVGEPSAEDTIGILRGLKERYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAAS RLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDDASADRLEKLRAELADYKEKLAELTARWHNEKNAIDVVRELKEQL ETLRGESDRAERDGDLAKAAELRYGRIPEVEKKLEAALPKAEAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLEGETAK LLRMEDELAKRVVGQRKPVQAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYG EKHSVARLVGAPPGYIGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS NLGSGGTDEEVMAAVRAAFKPEFINRLDDVLIFEGLNPEELVRIVDIQLEQLDKRLAQRRLALEVSLPAKKWLAERGFDP IYGARPLRRLIQQAIGDQLAKLLLAGEVHDGDTVPVNISPDGDALILG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004521600.1 | endopeptidase ATP binding protein (chain B) ClpB | VFG2076 | Protein | 1e-107 | 43 |
| clpB | YP_004521600.1 | endopeptidase ATP binding protein (chain B) ClpB | VFG2084 | Protein | 4e-110 | 41 |
