Gene Information

Name : PP1Y_AT19244 (PP1Y_AT19244)
Accession : YP_004534619.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2039981 - 2040418 bp
Length : 438 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K03469 ribonuclease HI

DNA sequence :
ATGAAGCAGGTCGACATCTTCACCGACGGCGCCTGCAAGGGCAATCCCGGCCCGGGTGGCTGGGGCGTGCTCCTGCGCAT
GGGCCCGCATGAGAAGGAAATGTCCGGCGGCGAGCCAGAGACCACCAACAACCGCATGGAGATGACCGCCGTCATCAAGG
GCCTCAATGCCCTGATCGAGCCGTGCGAAGTGGTGATCCACAGCGACAGCAAGTACGTCATCGACGGCATGACCAAGTGG
GTCCACGGCTGGCGCAAGAAGGGCTGGGTCAATGCCAGCAAGCAACCTGTGCGCAATGCAGACCTGTGGCACGAGCTGAT
CGAAGCGGTCGCCCGGCACAAGGTGCACTGGCAATGGGTGCGCGGCCATTCCGGCCATGTCGAGAACGAACGAGTAGACA
AGCTGGCGAGCGATGCCGCCCAGTCCGCAGGACACTAG

Protein sequence :
MKQVDIFTDGACKGNPGPGGWGVLLRMGPHEKEMSGGEPETTNNRMEMTAVIKGLNALIEPCEVVIHSDSKYVIDGMTKW
VHGWRKKGWVNASKQPVRNADLWHELIEAVARHKVHWQWVRGHSGHVENERVDKLASDAAQSAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 6e-39 59