Gene Information

Name : PP1Y_AT28765 (PP1Y_AT28765)
Accession : YP_004535474.1
Strain : Novosphingobium sp. PP1Y
Genome accession: NC_015580
Putative virulence/resistance : Unknown
Product : glyceraldehyde 3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 3021074 - 3022081 bp
Length : 1008 bp
Strand : -
Note : assigned by KAAS to KEGG Orthology:K00134 glyceraldehyde 3-phosphate dehydrogenase

DNA sequence :
ATGGCGACCAAGGTTGCTATCAACGGTTTCGGACGTATCGGACGCCTTGTCGCCCGGGCCATTCTCGAGCGCCCCGACTG
CGGTCTCGACCTCGTTTCGATCAACGACCTGGCCGACACCAAGTCGAATGCTCTCCTCTTTGCCTATGACAGCACCCACG
GTCGCTTCCCCGGCACCGTCGAGGCCGGCGAAGGCAAGATCACCGTCAACGGCAAGGACATCGTCGTCACTGCCGAGCGC
GATCCGGGCAAGCTGCCGCACAAGGATCTGGGCATCGACATCGTGCTCGAGTGCACGGGCTTCTTCCAGTCGAAGGAAGC
GTCGCAGCCGCACCTCGATGCGGGCGCGAAGCGCGTGCTGATCTCGGCCCCGGCCACCGGCGTCGACAACACCGTCGTCT
TCGGCGTGAACCACGAGACGCTGACCGCCGATCACATCGTCGTGTCGAACGCTTCATGCACCACGAACTGCCTCGCCCCG
GTTGCCAAGGTCCTCAACGACACCGTCGGCATCGAGCGTGGCTTCATGACCACGATCCACAGCTACACCAATGACCAGCG
CATGCTCGACCAGATCCACAGCGATCTGCGCCGCGCCCGTGCCGGTGCCGCCAACATGATCCCGACCACCACTGGCGCTG
CCCGCGCGGTCGGCCTCGTGCTGCCGGAACTCAAGGGCAAGCTGGACGGTTCGTCGGTCCGCGTGCCGACCCCGAACGTC
AGCCTGGTCGACCTGTGCTTCGTGCCGAAGCGCGACACCACCAAGGAAGAAATCAACGCCGCTCTCAAGGCAGCGTCGGA
AGGCCCGATGAAGGGCGTCCTGGCCTACACCGAAGAGCCGCTGGTTTCGTCGGACTTCAACCACTACCCGGCGAGCTCGA
CCGTCGACAGCCTCGAGACGGCCGTCATGGAAGGCAAGTTCGTCCGCGTCGTATCCTGGTACGACAACGAGTGGGGCTTC
TCGAACCGCATGCTCGACACTGCGGGTGCGATGGCGAAGTTCCTCTGA

Protein sequence :
MATKVAINGFGRIGRLVARAILERPDCGLDLVSINDLADTKSNALLFAYDSTHGRFPGTVEAGEGKITVNGKDIVVTAER
DPGKLPHKDLGIDIVLECTGFFQSKEASQPHLDAGAKRVLISAPATGVDNTVVFGVNHETLTADHIVVSNASCTTNCLAP
VAKVLNDTVGIERGFMTTIHSYTNDQRMLDQIHSDLRRARAGAANMIPTTTGAARAVGLVLPELKGKLDGSSVRVPTPNV
SLVDLCFVPKRDTTKEEINAALKAASEGPMKGVLAYTEEPLVSSDFNHYPASSTVDSLETAVMEGKFVRVVSWYDNEWGF
SNRMLDTAGAMAKFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 6e-67 45