Gene Information

Name : Thicy_1558 (Thicy_1558)
Accession : YP_004537795.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1800714 - 1801022 bp
Length : 309 bp
Strand : -
Note : PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0846 microcompartments protein

DNA sequence : 
ATGAGCAATGAATACGGTATTGCCTTAGGAATGATTGAAACTCGCGGTCTAGTTCCTGCTATCGAAGCAGCTGATGCGAT
GACAAAAGCAGCGGAAGTACGTTTAATTACACGTGAGTTTGTTGGTGGTGGTTATGTAACTGTTATGGTTCGTGGCGAAA
CTGGTGCGGTAAACGCAGCGGTTCGTGCTGGTGCTGACGCTTGTGAACGTGTTGGTGATGGCCTTGTAGCGGCTCACATT
ATTGCACGTCCTCATAAAGAAGTTGAGCCAGTACTGGTTGCGGGTCTTAACCCAGCAGCACGTCTGTAA

Protein sequence : 
MSNEYGIALGMIETRGLVPAIEAADAMTKAAEVRLITREFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARPHKEVEPVLVAGLNPAARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 59
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 55
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-11 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thicy_1558 YP_004537795.1 microcompartments protein VFG1596 Protein 6e-12 59
Thicy_1558 YP_004537795.1 microcompartments protein VFG1597 Protein 6e-12 55
Thicy_1558 YP_004537795.1 microcompartments protein VFG1598 Protein 1e-11 49