Gene Information

Name : Thicy_1559 (Thicy_1559)
Accession : YP_004537796.1
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1801098 - 1801397 bp
Length : 300 bp
Strand : -
Note : PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0845 microcompartments protein

DNA sequence : 
ATGTCAACTGAATATGGTATCGCTCTAGGTATGATTGAAACTCGTGGTCTTGTTCCAGCAATTGAAGCAGCTGATGCGAT
GACTAAAGCAGCCGAAGTACGTTTAGTATCTCGTGATTTTGTTGGTGGTGGTTATGTAACCGTTATGGTTCGTGGCGAAA
CTGGTGCGGTAAACGCAGCGGTCCGTGCTGGTGCTGACGCTTGTGAACGTGTTGGTGATGGCCTTGTAGCGGCTCACATT
ATTGCACGTCCGCACAAAGAAGTTGAACCTGTACTAACTTCAACTCTTCAGCAAGCTTAA

Protein sequence : 
MSTEYGIALGMIETRGLVPAIEAADAMTKAAEVRLVSRDFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARPHKEVEPVLTSTLQQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-12 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-11 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thicy_1559 YP_004537796.1 microcompartments protein VFG1596 Protein 5e-12 56
Thicy_1559 YP_004537796.1 microcompartments protein VFG1597 Protein 4e-12 52
Thicy_1559 YP_004537796.1 microcompartments protein VFG1598 Protein 3e-11 48