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Name : Thicy_0230 (Thicy_0230) Accession : YP_004536485.1 Strain : Thioalkalimicrobium cyclicum ALM1 Genome accession: NC_015581 Putative virulence/resistance : Unknown Product : TrmH family RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 225344 - 226084 bp Length : 741 bp Strand : + Note : KEGG: tcx:Tcr_0615 RNA methyltransferase TrmH, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU DNA sequence : ATGCAGGATCAGTTTGAGCCACTACCCTTAATTCGGATTGTTTTGGTTGCTACGTCGCACCCAGGTAATATAGGCGCTGT GGCGCGAGCTATGAAGAATATGGGTTTGCACGATTTAGTGCTAGTGAATCCAAACCAGTTTCCATCCTATGAGGCATCGG CACGTGCTTCAGGCGCGGCTGATATTCTTGATCAAGCACGGGTTGTTTCAACCTTGGCTGAGGCATTAGCTGACTGTCAC CAAGTCATCGGTGCGAGTGCGCGTCTGCGCAAAGTCGCTTGGCCACAGCTATCATCACGTGAGGTAGGTGAGTTTGCGGT AAGGGCTGCCGATGTTGGTCGGGTTGCACTTGTATTTGGGCGTGAGGATTCGGGCTTAACCAATGAGGAGTTAGATCAGT GTGATAAATTAGGGCATATTGCGTCGAATCCAACATACAGTTCATTAAATCTGGCGGCAGCGGTGCAGGTTTTTGCTTAT GAGTGTCGTATGGCGTGTGGTGCGGTTGTTCCGCAAAGTGAAGGCTATCGTTATCAACCAGCAACTCATGCGGACATGGA AGGTTTTTACGTTCATTTAGAACAGGCCCTGTTGCAGGTTAATTATCTAGATCCCAATAAGCATGAACGTTTTATGCGTC GAATGCGACGGTTATTTAATCGAGCCCAGCCCGATTCAAAAGAAATTGCGATACTGCGTGGCATGTTAACCGCGGTGATA AAAGCGTCTAACCCCCAGTAA Protein sequence : MQDQFEPLPLIRIVLVATSHPGNIGAVARAMKNMGLHDLVLVNPNQFPSYEASARASGAADILDQARVVSTLAEALADCH QVIGASARLRKVAWPQLSSREVGEFAVRAADVGRVALVFGREDSGLTNEELDQCDKLGHIASNPTYSSLNLAAAVQVFAY ECRMACGAVVPQSEGYRYQPATHADMEGFYVHLEQALLQVNYLDPNKHERFMRRMRRLFNRAQPDSKEIAILRGMLTAVI KASNPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 5e-50 | 53 |
