Gene Information

Name : Thicy_R0019 (Thicy_R0019)
Accession : -
Strain : Thioalkalimicrobium cyclicum ALM1
Genome accession: NC_015581
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 743751 - 745278 bp
Length : 1528 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGAATGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGGACGGTAACAGGGGAGCTTGCTC
CTGCTGACGAGTGGCGGACGGGTGAGTAAGGCATGGGAATCTGCCCTTTGGTTGGGGATACCGTATGGAAACGTACGTTA
ATACCGAATGAGATCTACGGATGAAAGGTGGCCTCTACTTGTAAGCTATCGCCAAAGGATGAGCCCATGTTAGATTAGCT
AGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCTATAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACA
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGTGT
GAAGAAGGCCCGAGGGTTGTAAAGCACTTTTAGTGAGGAGGAAAGGCAGTTAGTTAATACCTGATTGCTGTGACGTTACT
CACAGAAAAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTATTCGGAATTACTGGGC
GTAAAGCGCGCGTAGGCGGATTGTTAAGTCAGTTGTGAAAGCCCTGGGCTCAACCTAGGAACGGCGATTGAAACTGGCAG
TCTAGAGTTTAGTAGAGGGAAGGGGAATTTCTGGAGTAGCAGTGAAATGCGTAGATATCAGAAGGAACATCAGTGGCGAA
GGCGCCTTCCTGGACTAAAACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACGGGATTAGATACCCCGGTAGTCCACG
CCCTAAACGATGTCAACTAGCTGTTGGTCTTATTAAAAAGATTAGTAGCGCAGCTAACGCGATAAGTTGACCGCCTGGGG
AGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCA
ACGCGAAGAACCTTACCATCCCTTGACATCCACAGAACTTTCTAGAGATAGATTGGTGCCTTCGGGAACTGTGAGACAGG
TGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCATTAGTTGC
TACCATTTAGTTGAGAACTCTAATGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCC
CTTATGGGATGGGCTACACACGTGCTACAATGGTCGGTACAAACAGTTGCGAAGCCGCGAGGTGGTGCGAATCTGAAAAA
ACCGATCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAAATCAGAATGTTGC
GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACC
TTCGGGAGGACGGTTACCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCCTATCGGAAGGTGGGGCTG
GATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-261 88.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-261 88.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-262 88.2
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-262 88.2
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-261 87.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-261 87.7