Gene Information

Name : Isova_1731 (Isova_1731)
Accession : YP_004542374.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : 1-deoxy-D-xylulose-5-phosphate synthase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : 2.2.1.7
Position : 1868177 - 1869127 bp
Length : 951 bp
Strand : +
Note : KEGG: fre:Franean1_0407 transketolase central region; PFAM: transketolase-like, pyrimidine-binding domain; transketolase, C-terminal

DNA sequence :
ATGACCACCACCGCACCCGCAGCGCTCCATGACTGCCGCGACGCCTACGTCGGTGCTCTCGTGGAGCTCGCCGCAGAGGA
CGACCGGATCGTCGCGGTCGTCAACGACTCCGTCGGCTCCAGCAAGCTCGCGCCCTTCGCCGAGAAGTACCCCGAACGCC
TGATCAACGTCGGCATCGCCGAGCAGGACATGGTGGGAGTCGCCGCGGGCCTGGCGAACGGGGGCAAGATTCCGTTCGTC
TCGGCCGCGTCGTGCTTCCTGACGGCTCGTGCGATGGAGCAGATCAAGGTCGACGCCGCCTACTCGAACCATCACATGGT
CCTGTGCGGCATGAGCCCGGGCATGGCCTACGGGGAGCTCGGTCCGACGCACCACTCGATCGAGGACCTCGCGTGGCTGC
GCACCATCCCTGGCCTGACCGTCGTCGTCCCGGCGGACCCCGCAGAGACGGCCCAGGCCATCCGCTGGGCGGCCGGCCAC
GACGGGCCCGTCTTCGTCCGGGTCTCGCGCATGGGAGTCCCCGACGTCAACCCCGGCGGCTACGAGTTCACGCCGGGCAA
GGCCGTGACGTTGCGGGAGGGCTCGGACGTGACGATCGTGGCCACCGGGACGGTCGTGTCCCGTGCGCTCGAGGCGGCGG
ACGTGCTCGGTGAGAACGGTGTCAGCGCTCGGGTGATCTCGATGCCGACGATCAAGCCGCTCGACTCCACGGCGATCCTC
GCCGCCGCGGCCGAGACGCGCGGGATCGTCACGGTCGAGGAGGCGCTCACCAGCGGTCTCGGCGGCGCGGTCGCGGAAGT
GGTGGTCCAGCAGCACCCTGTGCCCGTGCGCTTCGTCGGTGTCCGTGACCAGTTCGCGCCGACCGGTTCGGTGGGATGGC
TCCTCGATCATTTCGGGATCAACTCCGAGGGAATCGTCCGAGCCGCCAAGGATCTGCTCGATCGCGTCTAG

Protein sequence :
MTTTAPAALHDCRDAYVGALVELAAEDDRIVAVVNDSVGSSKLAPFAEKYPERLINVGIAEQDMVGVAAGLANGGKIPFV
SAASCFLTARAMEQIKVDAAYSNHHMVLCGMSPGMAYGELGPTHHSIEDLAWLRTIPGLTVVVPADPAETAQAIRWAAGH
DGPVFVRVSRMGVPDVNPGGYEFTPGKAVTLREGSDVTIVATGTVVSRALEAADVLGENGVSARVISMPTIKPLDSTAIL
AAAAETRGIVTVEEALTSGLGGAVAEVVVQQHPVPVRFVGVRDQFAPTGSVGWLLDHFGINSEGIVRAAKDLLDRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 3e-34 41