Gene Information

Name : Desru_0890 (Desru_0890)
Accession : YP_004544452.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG2038
EC number : -
Position : 919627 - 920685 bp
Length : 1059 bp
Strand : +
Note : TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: drm:Dred_2728 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase

DNA sequence :
ATGCAGCTGTTAAATAAAACCCTGGCCAATATCCAAGCTCCTTGTGCAGCCAGTCAAAAGGCGGCCAAAGAAAGGCTGGA
TAATCTGACGAAACCTCCTGGGAGTCTTGGGTTGCTGGAGGAAATTGCTTACCGTATGGCAGGCATGCAAGGAAACAGCC
TGCCCCAATTGCCCCAGGAGAAGCTGGTTGCCGTGTTTGCCGGTGATCACGGGGTGGTGGCGGAGGGAGTCAGTGCTTTT
CCCCAGGAAGTAACACCCCAGATGGTATTGAATTTTCTCAGAGGTGGTGCGGCCATCAATGTTCTGGCGCGCCAGGCAGG
GGCCCGGGTTGTGGTGGCAGACATCGGGGTAGCCGGGGCTCCCATGGAACATCCGGAGCTGATAAACTGCCGGATTAAAG
CCGGCACGGCAAACTTTACCGAGGGCCCTGCCATGAGCCGGGAGGAGGCTGTCCGGGCGATTGAAACAGGAATTGGCCTG
GTGCGGCAGCAGGTAAAAGAGCGGCCGGCCCTGGTGGGGCTGGGTGAAATGGGCATTGGCAACACAACCGCCAGCAGCGC
CGTTCTGGCAGCCTTCAGCGGTCTTCAGGCCGACCGGATTACCGGCAGGGGAACCGGGATTGACGAACACAGGCTTCAGC
ATAAGATTTCTGTGATTCAGCGGGCTTTGGAAGTAAACCGGCCGGATCCCGGAGACGGGCTGGATGTGCTGGCCAAGGTA
GGGGGATTGGAAATTGCCGGACTGGCCGGCGTTATTCTGGGGTGTGCCGCGGAAAAAATACCGGTCGTCATCGACGGGTT
CATCTCCGGGGCTGCGGCCCTGGTGGCCTGCGCCCTGTCACCCCTTAGCCGGGAGTACTTGTTTGCTTCCCATGTTTCTG
CCGAACCAGGTCATAACCATGTACTGGAAATATTAAATTTAAAGCCCCTCCTGCATATGGATATGAGATTGGGAGAAGGG
ACCGGGGCGGTTCTGGCCTTCCCCATTATTGAGTCGGCAATTCATATCCTTCATGAAATGGCAACCTTTGCGGAGGCGGG
AGTCAGCCAAGGCAAATAA

Protein sequence :
MQLLNKTLANIQAPCAASQKAAKERLDNLTKPPGSLGLLEEIAYRMAGMQGNSLPQLPQEKLVAVFAGDHGVVAEGVSAF
PQEVTPQMVLNFLRGGAAINVLARQAGARVVVADIGVAGAPMEHPELINCRIKAGTANFTEGPAMSREEAVRAIETGIGL
VRQQVKERPALVGLGEMGIGNTTASSAVLAAFSGLQADRITGRGTGIDEHRLQHKISVIQRALEVNRPDPGDGLDVLAKV
GGLEIAGLAGVILGCAAEKIPVVIDGFISGAAALVACALSPLSREYLFASHVSAEPGHNHVLEILNLKPLLHMDMRLGEG
TGAVLAFPIIESAIHILHEMATFAEAGVSQGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cobT YP_853092.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Not tested PAI IV APEC-O1 Protein 9e-57 44