Gene Information

Name : Sinme_2463 (Sinme_2463)
Accession : YP_004549793.1
Strain :
Genome accession: NC_015590
Putative virulence/resistance : Virulence
Product : regulatory protein TetR
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 2468411 - 2468971 bp
Length : 561 bp
Strand : -
Note : PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: smd:Smed_2329 TetR family transcriptional regulator

DNA sequence : 
ATGACAAGCGCCCCCTCCAGGAAGAAGCAACCGCAACGCGTCCGCCGGCAATTGCTGGAGGTTGCGGCACGCCTGTCGCT
GGAGCAGGGCGTCGCCGCGGTGACCCTCGACGCCGTATCGCAGGCGGCGGGTGTCAGCAAAGGCGGGCTGCTGCACCATT
TCCCCAACAAGCTGGCTCTCCTCGACGCCCTCTTCGATGACCTCGTCGCGCGTTTCGACAGCGCCCTCGACGAAGCGATG
GCTGGAGATGACGTCGAGAAGGGACGCTTTACGCGGGCCTATCTCGGCGTCTGTTTCGCGCTCGACGCGGAGGCGGAGGC
GCAAGGCTGGCAGATGCTGACCATTGCGCTCCTGGCCGAGCCGCATCTCAAGGAGCGTTGGCGCGAATGGGTGGCGCGCC
GGTCCGCGCAATTCGCCGCGACGGACAGTTCGCCAAGTTGCCTGCTCGCCCGCTTCGCCGCCGATGGTGTCTGGCTGTCG
GATCTGATGCGCAGCCATGACATCGAAGCACCGACCCGGGCGATCCTGCTTCAGAAGCTCAACGCGCTTTCGCTGGAATA
G

Protein sequence : 
MTSAPSRKKQPQRVRRQLLEVAARLSLEQGVAAVTLDAVSQAAGVSKGGLLHHFPNKLALLDALFDDLVARFDSALDEAM
AGDDVEKGRFTRAYLGVCFALDAEAEAQGWQMLTIALLAEPHLKERWREWVARRSAQFAATDSSPSCLLARFAADGVWLS
DLMRSHDIEAPTRAILLQKLNALSLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42082.1 hypothetical protein Not tested PAI II 536 Protein 6e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_2463 YP_004549793.1 regulatory protein TetR VFG1601 Protein 2e-27 43