Gene Information

Name : Sinme_0486 (Sinme_0486)
Accession : YP_004547863.1
Strain :
Genome accession: NC_015590
Putative virulence/resistance : Unknown
Product : D-lactate dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 500059 - 501498 bp
Length : 1440 bp
Strand : +
Note : KEGG: smd:Smed_0394 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal

DNA sequence :
ATGCCGGAGACGATCGGCTTTCTGAAGCCAAGGCAGGCCGTCCTCGATCGTCGGCGGGAAATCGTCGCCGATCTTGCCGA
TCTGTTGCCGGAAGGCGGCCTCATCAGCGACGAGCGCGGCCTCAAGCCCTTCGAGACGGATGCGTTTATCGCCTATCGGC
GGATGCCGCTCGCGGTCGTTCTTCCCGAGACGACGGAGCACGTGGCCGCGGTGCTCAAATATTGCAGCCGCTACGGCATT
CCGATCGTGCCGCGGGGCGCCGGCACCTCGCTCTCCGGCGGCGCCATTCCTCAGGAGGACGCGATCGTCGTCGGTCTGTC
GAAGATGTCGCGCACCCTGGATATCGACCTGTTCAACCGCACGGCGACGGTTCAGGCGGGCGTGACCAATCTCAATATTT
CCGATGCGGTTTCGGCCGACGGCTTCTTCTATGCCCCGGATCCGAGTTCGCAGCTCGCCTGCACCATAGGCGGGAACATC
GGGATGAATTCCGGCGGCGCGCACTGTCTGAAGTACGGGGTTACGACCAACAACCTTCTGGGCGTCAAGATGGTGCTTTT
CGACGGCACCGTGATCGAACTCGGCGGCAAGGCGCTCGACGCGCCGGGATACGACCTGCTTGGGCTCGTCTGCGGTTCGG
AGGGGCAGCTCGGCATCGTCACGGAAGCGACGGTGCGGCTGATTGCGAAGCCCGAAGGTGCGCGGCCCGTGCTCTTCGGA
TTTGCCTCTTCCGAGTCCGCCGGCAGCTGCGTCGCCGATATCATTGGATCGGGCATCATCCCCGTCGCAATCGAATTCAT
GGACAGGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCAGGCCGGCTATCCGCTCGACGTCGAAGCATTGCTGATCGTCG
AAGTGGAAGGCTCCGAGGCTGAGATGGATGCGACGCTCGCCGGCATCATCGAGATCGCCCGCCGCCACGGCGTGATGACG
ATCAGGGAATCGCAATCGGCTCTGGAAGCGGCACTGATCTGGAAGGGGCGTAAGTCGGCCTTCGGCGCAACCGGCCGGAT
TGCCGACTATATCTGCATGGACGGAACGGTGCCGCTGAGCCAGCTCTCCCATGTCTTGCGCCGGACCGGGGAGATCGTCG
CCGGCTACGGCCTGCGGGTAGCGAATGTCTTCCATGCCGGCGATGGCAACATGCATCCGCTGATCCTCTACAACATCAAC
GATCCGGAGGAAGCTGCCCGCGCGGAAGCTGCCGGCAACGACATACTGAAGCTTTGCGTCGAGGCGGGCGGCTGCCTGAC
CGGGGAACACGGCGTCGGCATCGAGAAACGCGATCTGATGCTGCACCAGTACAGCAGGGCCGATCTCGGCCAGCAGATGG
CGGCGCGCGCCGCCTTCGATCCGCAATGGCTTATGAACCCGTCGAAGGTTTTTCCGCTCGAAGGACGGCCCGCGGCATGA

Protein sequence :
MPETIGFLKPRQAVLDRRREIVADLADLLPEGGLISDERGLKPFETDAFIAYRRMPLAVVLPETTEHVAAVLKYCSRYGI
PIVPRGAGTSLSGGAIPQEDAIVVGLSKMSRTLDIDLFNRTATVQAGVTNLNISDAVSADGFFYAPDPSSQLACTIGGNI
GMNSGGAHCLKYGVTTNNLLGVKMVLFDGTVIELGGKALDAPGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG
FASSESAGSCVADIIGSGIIPVAIEFMDRPAIEICEAFAQAGYPLDVEALLIVEVEGSEAEMDATLAGIIEIARRHGVMT
IRESQSALEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLRRTGEIVAGYGLRVANVFHAGDGNMHPLILYNIN
DPEEAARAEAAGNDILKLCVEAGGCLTGEHGVGIEKRDLMLHQYSRADLGQQMAARAAFDPQWLMNPSKVFPLEGRPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 2e-100 48