Gene Information

Name : VAA_03204 (VAA_03204)
Accession : YP_004565897.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Resistance
Product : LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1343695 - 1344381 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAACCTTTTACAATGCCATAACGTATGCAAAACCTACCAAGAAGGGGAGCTACGGACTCAAGTGCTAAAAGGCGT
CAGTTTTGGCATTCAAGCGGGGGAGTTAGTCTCAATTATTGGGACTTCTGGATCTGGGAAAAGTACGTTATTACACATTC
TGGGTGCACTAGATGAGGCAACCGAAGGTTCAGTGTCGTTTTTAGGTCAGGATTTATCGAGCTTAAGCTCCAATAAACAA
GCGAACATTCGCAATCAACATTTGGGTTTTGTGTACCAGTTCCACCATTTATTAGCCGATTTCACCGCTCTTGAGAATGT
TGCCATGCCGTTGCTTATTGGTGGCCAAAAAGCATCGCGTGCTAAACAGGCCGCGCAAGCACTGTTAGAAAAAGTGGGGT
TGGGACATCGTTTATCTCATCGACCCTCAGAGCTCTCTGGTGGAGAGCGGCAACGGGTAGCGATTGCGCGAGCGCTTGTT
AATCAACCCGATTTGGTGTTAGCCGATGAGCCTACGGGCAACCTTGATCACAAAACGGCGCTGGCGATTTATGATTTGAT
GCGTCAAATGAATCAAGAGTTTGGCACGGCATTTTTAGTGGTAACGCATGATAGCGAACTTGCTGAAAAAATGGACAGAC
AGATGCACATGCAAGATGGTTTGCTGATTAATGTGGAGGCGCCGTAG

Protein sequence : 
MNNLLQCHNVCKTYQEGELRTQVLKGVSFGIQAGELVSIIGTSGSGKSTLLHILGALDEATEGSVSFLGQDLSSLSSNKQ
ANIRNQHLGFVYQFHHLLADFTALENVAMPLLIGGQKASRAKQAAQALLEKVGLGHRLSHRPSELSGGERQRVAIARALV
NQPDLVLADEPTGNLDHKTALAIYDLMRQMNQEFGTAFLVVTHDSELAEKMDRQMHMQDGLLINVEAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_03204 YP_004565897.1 LolD NC_012469.1.7686878. Protein 4e-35 45
VAA_03204 YP_004565897.1 LolD NC_008702.1.4606598. Protein 4e-31 44