Gene Information

Name : VAA_03089 (VAA_03089)
Accession : YP_004566013.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1471309 - 1473417 bp
Length : 2109 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGATTTAAATGAAAAAAAAGCCATGTTACATTGCTTATCAGTCTACTTACCGCTGATCGGAATTCGTGAGATAAA
ATTAGATATCTCTAATAAAACGCCATCCAATGCAATTGATTCAATAATAAAAGATTTAAAAGGAAGAAATTATTTAGTCA
CTGCTAATAAAGCGAAGTCTTTTACTGGGATTACTAAAATAAAGAAACCGATTATTTTATTTAACAAAAACAATCACCCA
TTTATTTTAGCTAAAGTTGAACAGGGTAAATGTTTAATTCATCCATGTGATTCAGATACCCCAAAAGTAGTAGATACAAG
CTATTTAAAACAGAATTGGAATGGAAAAACGCTAGATATCAAAAAAAAACAATCCTCTTTTGATATTCGTTGGTTCTTAC
CTGAATTATCGCAACATAAACATTTAATCGCTGAGATTGTTTTATTCTCTTTCGTACTGCAAGTTATTGCACTTATTACA
CCGCTATTTTTCCAAGTCGTGATGGACAAAGTATTAGTGCATCAAGCCCACTCGACACTCGATGTTTTAGTGTTCGTCTT
AGTTATTTCTGGAATAGCTGAGGTATTGCTACGCGGTTTACGCGAATATCAATATGCTCATACCGCTAACCGCATTGATA
TTAAGCTTGGCATTAAATTGGTTCACCATCTGTTTGGTTTGCCGCTGCTGTTTTTCAAATCAAGGCAAGTTGGGGCGATT
GTGACTCGAGTAAGAGAGCTCGATACCATACGCGAGTTCATCACAGGTTCGATGTTTACCCTCACGATTGATCTCGTTTT
TCTCGTGATCTTTTTCTATGTGATGAGCTTACTTTCTGGCGGGCTAACCCTATTGGTATTGGCCACACTGCCGTGTTATC
TCTTTTTGGCTTGGTGGCTAACCCCAAGGCTGCAACAAGCGATTGAACAACAATTTACCCATATGGCGCACAACACTTCG
TTTCTAACTGAAACCGTCGCGGGGAGTGATACCATTAAAAGCTTAGCGACTGAACCTCGCTTTATTCGACGTTGGGATAC
TCAAACCGAACAGATGATATCGAGCAACTATGTGGTTCAGCAGTGGAATAACCGCTCTAGCCACGCAGTGCAGTTCATCC
AAAAAATAGCGAGCGTCTTTCTACTATGGATTGGCGCATCAGAAGTGCTCGCGTTACAAATGACCATAGGTCAACTGATC
GCTTTTAACATGCTCGCCAGTCATGTTGCACAAACTCTTGCCCGGCTCGTCGAGCTGTGGGGGCAATTTATACAAGCGCA
AATTGCAGTCGATAAACTTTCCGACCTACTCAATTTGCCCACCGAGCAGCAGCAAGCCAGCCATCCTCTACAGCTGCAAG
GTGCGATCACTCTCAATCAGGTGAGTTTCCGTTATCAACCCGATTTACCGCTGACCATCAATCAGCTTTCACTCAATATC
CAAGCGGGTGAGAAAATTGGTGTGGTCGGTGGCTCGGGGTCGGGAAAAAGCACCTTGGCTCGGCTTTTACTCAAGCTGTA
CAGCCCTGAATCAGGCCAAATCATGTTCGATAACACCCCACTCAAACAGATCGGTGTTCATGAATTACGTCGCCAGTTGG
GGGTAGTATCACAAGAGAACTTTCTCTTTAGTAAAAGTGTTAGTGACAACATTGCCCATTCAAAGCCACAAGCCAACTTG
GATGAGATTGTGCGAGCAGCAAAATTAGCGGGCGCTCATGAGTTTATTTTAAAGCTGCCACTGGGTTACGACACGATTTT
AGCTGAAGGGGGGCAGTCACTTTCAGGCGGACAACGACAACGTTTAGCCATTGCCCGCACACTGCTTGCAGACCCTAAGA
TTTTGATTCTTGATGAAGCCACCAGCGCTTTAGATGATGAATCACAAGCCATCATTCAAACCAATATGGAGCAAATTGCC
GCCGGGCGTACCGTTATCACCATCGCACACCGCCTCTCTACGGTAAGAGAGTGTGACCGGATTATCGTGCTGGAAAAAGG
CGAGATTGCAGAGCAAGGCACGCATCTACAACTTCTCGCAGAGCAAGGCAAATATTTCCAGCTGTGGCAACTGCAACGAG
CATTAAAACAAGAGGATGAGCGAGTATGA

Protein sequence : 
MTDLNEKKAMLHCLSVYLPLIGIREIKLDISNKTPSNAIDSIIKDLKGRNYLVTANKAKSFTGITKIKKPIILFNKNNHP
FILAKVEQGKCLIHPCDSDTPKVVDTSYLKQNWNGKTLDIKKKQSSFDIRWFLPELSQHKHLIAEIVLFSFVLQVIALIT
PLFFQVVMDKVLVHQAHSTLDVLVFVLVISGIAEVLLRGLREYQYAHTANRIDIKLGIKLVHHLFGLPLLFFKSRQVGAI
VTRVRELDTIREFITGSMFTLTIDLVFLVIFFYVMSLLSGGLTLLVLATLPCYLFLAWWLTPRLQQAIEQQFTHMAHNTS
FLTETVAGSDTIKSLATEPRFIRRWDTQTEQMISSNYVVQQWNNRSSHAVQFIQKIASVFLLWIGASEVLALQMTIGQLI
AFNMLASHVAQTLARLVELWGQFIQAQIAVDKLSDLLNLPTEQQQASHPLQLQGAITLNQVSFRYQPDLPLTINQLSLNI
QAGEKIGVVGGSGSGKSTLARLLLKLYSPESGQIMFDNTPLKQIGVHELRRQLGVVSQENFLFSKSVSDNIAHSKPQANL
DEIVRAAKLAGAHEFILKLPLGYDTILAEGGQSLSGGQRQRLAIARTLLADPKILILDEATSALDDESQAIIQTNMEQIA
AGRTVITIAHRLSTVRECDRIIVLEKGEIAEQGTHLQLLAEQGKYFQLWQLQRALKQEDERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 6e-116 46
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 6e-116 46
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 6e-116 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_03089 YP_004566013.1 hypothetical protein VFG1269 Protein 2e-122 48
VAA_03089 YP_004566013.1 hypothetical protein VFG1501 Protein 3e-116 46
VAA_03089 YP_004566013.1 hypothetical protein VFG0907 Protein 3e-116 46
VAA_03089 YP_004566013.1 hypothetical protein VFG1557 Protein 3e-116 46
VAA_03089 YP_004566013.1 hypothetical protein VFG0841 Protein 3e-110 43