Gene Information

Name : ytsC (BCO26_1324)
Accession : YP_004568769.1
Strain : Bacillus coagulans 2-6
Genome accession: NC_015634
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1376518 - 1377276 bp
Length : 759 bp
Strand : -
Note : PFAM: ABC_tran

DNA sequence : 
ATGATCCTTGAAGCAAAAAATGTTTATAAAACGTACGGCAACAAGTGGAACAAACAAGAAGTTTTAAAAGGGATTGATTT
AAATGTTGAAAAAGGAGAATTCACGAGCATTATGGGCCCGTCCGGATCAGGGAAAACGACATTGTTAAATGTCCTTTCCT
CGATTGACCGGCCCAGCCGCGGTTCCATTGAAATCGAAGGCAAAGCGTTGACGAAAATGAAAGACAAGCAGCTGGCGGAG
TTCCGGAAAAGGCATTTGGGCTTTATTTTCCAGGAATACCATTTGCTCGATACGTTAACGGTGAAGGAAAATATATTGCT
GCCGCTGTCTGTGAAAAAAGTTTCAAAACGGGAGGCGGACGAAAAATTCCTTGCGGTTGCGGAAGAACTCGGGATCGCCG
ATATCCAGGACAAGTATCCGAATGAAATATCCGGCGGGCAGAAGCAGCGGACATCGGCAGCGCGGGCGTTTGTCCATGAA
CCGAGCCTTATTTTTGCCGACGAACCAACAGGCGCGCTCGATTCAAAATCGGCATCCGACCTTTTGAATAAATTAAGCCG
CCTGAACGAAAAAAGAAAAGCAACCATCTTAATGGTCACCCATGATGCGGCCGCAGCCAGCTATTCGGGCAGGGTCATTT
TCATCAAAGACGGGCAGATTTATTCCCAACTGCATAAAGGCACCGAATCAAGGCAGGATTTCTATCAGGCCATCCTGAAA
ACACAGGTTGTGCTGGGAGGTGTGCAGCATGACGATTAA

Protein sequence : 
MILEAKNVYKTYGNKWNKQEVLKGIDLNVEKGEFTSIMGPSGSGKTTLLNVLSSIDRPSRGSIEIEGKALTKMKDKQLAE
FRKRHLGFIFQEYHLLDTLTVKENILLPLSVKKVSKREADEKFLAVAEELGIADIQDKYPNEISGGQKQRTSAARAFVHE
PSLIFADEPTGALDSKSASDLLNKLSRLNEKRKATILMVTHDAAAASYSGRVIFIKDGQIYSQLHKGTESRQDFYQAILK
TQVVLGGVQHDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytsC YP_004568769.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-41 44
ytsC YP_004568769.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-39 42
ytsC YP_004568769.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-37 41