Gene Information

Name : VAA_02843 (VAA_02843)
Accession : YP_004577929.1
Strain :
Genome accession: NC_015637
Putative virulence/resistance : Virulence
Product : ClpV protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 620279 - 622906 bp
Length : 2628 bp
Strand : +
Note : -

DNA sequence :
GTGATTGTAGTGATCCGTATTGAATTACCCACATTAATTTCAAAACTCAATGAACAGAGTAAGCTAGCCCTAGAGCAAGC
CGCTTCATTATGTATTGAACGTCAGCACCCAGAAGTGACCTATGAGCACTTCTTACATGTGTTGCTAGAGAACCCACTTT
CGGATGTGCGTGTGATAGCTAAGCACGCTAACTTAGATGTGGAAACCGTAAAACAAGCCATCAGTGCAAGTTACGCTCGT
GAACAAGTGTTAGATACCTATCCAGCATTCTCGCCACTGTTGGTTGAGCTATTGCAGGAAGCTTGGTTGCTTTCTACCAC
TGAGCTGAATCAGAATCAGCTTCGTTCAGGTGTGGTGTTTTTAGCCGCGTTGATGCGCGCTGATCGTTACCTACCACTTA
AACTAATCCGTCTTTTTGAACACATCAACAAAGAGAGCCTAAACAAAGGGTTTGATACGCTGTTGCAAGACTCTTCCGAG
TCGGCGGTTGAAAAAAGCAAAGCGGGTTCTCAAGCTCCTGCCGCGCTGGATGCAGCGTCATCTTCGCCACTGCATAAATA
CTGCACCAATGTCACGGCGCAAGCGCGTAACGGCGAACTGGACCCAGTATTGTGTCGTGAAAACGAACTCAATTTGATGA
TCGACATCTTGTGTCGTCGTCGTAAAAACAACCCCATCGTTGTGGGAGACGCTGGTGTCGGTAAAAGCGCCATGATTGAA
GGGCTTGCATTGCGCGTCGTTGCGGGCAATGTGCCGACACAGTTGCAAAATGTAGAGTTGTGCTCACTCGATCTAGGCTT
GTTACAAGCGGGTGCTTCGGTCAAAGGTGAATTTGAAAAACGTCTTAAAGGCGTGATTGACGCGATCAAAACCTCGCCTA
AACCGATCATTTTGTTTATCGATGAAGCGCACACTTTAATTGGTTCTGGCAACCAAGAGGGTGGTAGTGATGCGGCCAAC
TTGCTCAAGCCAGCTCTTGCGCGAGGCGAGCTCAGTACTGTCGCAGCCACCACATGGAAAGAGTACAAAAAGTATTTTGA
AAAAGATCCTGCGCTGACTCGTCGTTTCCAGTTAGTGAAATTAGAAGAGCCGAGCATCAGCCAAGCAGTAGATATTCTGC
GTGGCTTGAATCGTGTTTACGAAAAAGCCCATAACGTATTGATTACTGATGATGCATTGAAAGCCGCCGCCGAGCTTTCA
GCGCGTTACATTTCAGGTAGACAACTGCCGGATAAAGCGATTGATGTGTTGGATACTGCTTGCGCGCGTATTGCAATTAA
TATCACCACACCGCCGAAGCGCTTAGCGCAACTAGAGACCGCTTGCCATCAACGTCAACTTGAAATTGATATGCTTGAGC
GTGCTCAATATTTAGGTCAAGTGGTTGATTCGCATCGCTTGGATGAGCTATGTAGCCAAGAAGTGGCCGATGAAGCTGAA
AAAGCGACCTTGACTCAAAGCTGGCAAGAGCAAAAAGCGATCATTGAGCGCATTATTACCCTACGCGATCAGCTCTTAGA
TGGCGCTGAGGATCATGGTGAGCAGACCCAAGTTGAGCGCGATGAGTTACTTGTTCAATTGCAGGAGCAATATCGAGCTT
TAGAAGAGATCCCTCATAATGATCGTCTCATGCATCCACAAGTCGATGCTCAGCAAATAGCGGAAGTGATTGCGGACTGG
ACGGGCGTGCCCGTTGACCAAATGAACAGCGATGAGCTGCATAAAATCACCCACCTAACGGCTATTTTAGGTGAGGCAAT
CAAAGGGCAAGATACTGCAATTGAGCGTGTTCACCGTAACTTATTAACGGCGCGCGCGGATTTGCGCCGTCCGGGGCGTC
CAAAAGGTTCCTTCCTACTCGTGGGTCCAAGTGGCGTTGGTAAAACCGAAACGGTAGTCCAACTGGCGCAACAACTTTAT
GGTGGTAAACAATTTTTAACCACTATCAACATGTCGGAATATCAAGAAAAGCATACCGTTTCACGCCTGATTGGTTCGCC
TCCGGGTTATGTTGGTTATGGTGAGGGTGGCATTCTTACCGAAGCGATTCGTAAAATGCCGTACTCTGTGGTGCTGTTAG
ACGAAGTTGAAAAAGCGCACCCAGAAGTGCTCAATATTTTCTACCAAGCCTTTGATAAAGGTGAGCTGGCCGATGGTGAA
GGTCGAGTGATCGACTGCCAAAACATCGTCTTCTTCCTCACCTCGAATTTAGGTTACCAAACCATAGTCGATTACGCGCA
GCAGCCTCAGTTGCTTGATGAGCAGCTTTACCCAGAACTTGCGGCTTTCTTCAAACCCGCCTTACTGGCTCGTATGGAGA
TTATTCCGTATCTACCGCTCAGCAAAGAAGTGCTAGAGCAGATTGTGCGTGGCAAGTTAACCCGCCTTGAGCAGCTCTTT
AAACAGCGTTATGCCGCTGACGTGGTGATTGAAGATAGCTTGATCGAAGAGATCTTAAGCCGTGCCACGCGCTCTGAAAA
TGGGGCTCGTATGCTGGAAGCGATCATCGAAGGTCAATTACTACCACCGATTTCATTAGCTTTGTTAAATAAATTGGCTG
ATAAACAACCAGTGCAACGCATCTATTTAGCGGCGGAAGAGGGTGAGTTTATTGGAGAGGTTGAGTGA

Protein sequence :
MIVVIRIELPTLISKLNEQSKLALEQAASLCIERQHPEVTYEHFLHVLLENPLSDVRVIAKHANLDVETVKQAISASYAR
EQVLDTYPAFSPLLVELLQEAWLLSTTELNQNQLRSGVVFLAALMRADRYLPLKLIRLFEHINKESLNKGFDTLLQDSSE
SAVEKSKAGSQAPAALDAASSSPLHKYCTNVTAQARNGELDPVLCRENELNLMIDILCRRRKNNPIVVGDAGVGKSAMIE
GLALRVVAGNVPTQLQNVELCSLDLGLLQAGASVKGEFEKRLKGVIDAIKTSPKPIILFIDEAHTLIGSGNQEGGSDAAN
LLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLEEPSISQAVDILRGLNRVYEKAHNVLITDDALKAAAELS
ARYISGRQLPDKAIDVLDTACARIAINITTPPKRLAQLETACHQRQLEIDMLERAQYLGQVVDSHRLDELCSQEVADEAE
KATLTQSWQEQKAIIERIITLRDQLLDGAEDHGEQTQVERDELLVQLQEQYRALEEIPHNDRLMHPQVDAQQIAEVIADW
TGVPVDQMNSDELHKITHLTAILGEAIKGQDTAIERVHRNLLTARADLRRPGRPKGSFLLVGPSGVGKTETVVQLAQQLY
GGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGILTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQAFDKGELADGE
GRVIDCQNIVFFLTSNLGYQTIVDYAQQPQLLDEQLYPELAAFFKPALLARMEIIPYLPLSKEVLEQIVRGKLTRLEQLF
KQRYAADVVIEDSLIEEILSRATRSENGARMLEAIIEGQLLPPISLALLNKLADKQPVQRIYLAAEEGEFIGEVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 0.0 56
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 0.0 56
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-128 41
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_02843 YP_004577929.1 ClpV protein VFG2084 Protein 0.0 83
VAA_02843 YP_004577929.1 ClpV protein VFG2076 Protein 4e-150 42