Gene Information

Name : Lacal_0046 (Lacal_0046)
Accession : YP_004578327.1
Strain : Lacinutrix sp. 5H-3-7-4
Genome accession: NC_015638
Putative virulence/resistance : Unknown
Product : queuine tRNA-ribosyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0343
EC number : 2.4.2.29
Position : 49998 - 51128 bp
Length : 1131 bp
Strand : -
Note : PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: gfo:GFO_0596 queuine tRNA-ribosyltransferase

DNA sequence :
ATGACATTCGATTTAAAAGCAAAAGACTCGCAGAGTAAAGCTAGAGCAGGAGTAATAACAACAGATCATGGTGTAATAGA
AACACCAATATTTATGCCAGTTGGTACAGTGGCTTCTGTAAAAGGAGTGCACCAAAGAGAACTTAAAAATGATATTAATC
CAGATATTATTTTAGGAAATACATATCATTTGTATTTAAGACCTCAAATAGAAACTTTGGAAAAAGCTGGAGGTTTACAT
AAATTTATGAACTGGGATCGCAATATCTTAACAGATTCTGGTGGTTACCAAGTGTATTCTTTATCATCAAGAAGAAAGAT
TAAAGAAGAAGGCGTTAAGTTTAAATCTCACATAGATGGAAGTTACCATACATTTACGCCCGAAAATGTAATGGAGATAC
AACGAAGTATTGGAGCAGATATTATTATGGCGTTTGATGAGTGTACACCATACCCTTGTGATTATAATTACGCACGACGC
TCAATGCATATGACGCATAGATGGTTAGACCGTTGTATTAACCATCTTGAAAAAGTACCATTTAAGTACGATTATTCTCA
AGCATTTTTTCCAATAGTTCAAGGTAGTACATATAAAGATTTACGTAAACAATCTGCAGAATATATTGCAAATGCAGGAG
CAGTAGGTAATGCTATTGGAGGTTTATCTGTAGGAGAACCAGCAGAAGAAATGTATGCAATGACAGAAGTAGTAACAGAT
ATATTACCAGAAGATAAGCCACGTTATTTAATGGGTGTTGGTACACCAATAAATATTTTAGAAAATATTGCTTTAGGTGT
AGATATGTTTGATTGTGTTATGCCAACACGTAATGCAAGAAATGGTATGTTATTTACAGCTCATGGTACTATAAATATTA
AAAATTTAAAATGGAAAGACGATTTCTCTCCATTAGACGAAATGGCAATAACTTGGGTAGATACAGATTACTCTAAAGCT
TATGTTCGTCATTTATTTAGTGTTAATGAAAGATTGGCAGCGCAAATAGCTACCATACATAATCTTGGTTTTTATATGTG
GTTGGTGCGTGAAGCAAGAAAACATATATTAGCAGGAGATTTTAGAACATGGAAAGATACCATGGTTAAACAAATGGACA
AAAGACTGTAA

Protein sequence :
MTFDLKAKDSQSKARAGVITTDHGVIETPIFMPVGTVASVKGVHQRELKNDINPDIILGNTYHLYLRPQIETLEKAGGLH
KFMNWDRNILTDSGGYQVYSLSSRRKIKEEGVKFKSHIDGSYHTFTPENVMEIQRSIGADIIMAFDECTPYPCDYNYARR
SMHMTHRWLDRCINHLEKVPFKYDYSQAFFPIVQGSTYKDLRKQSAEYIANAGAVGNAIGGLSVGEPAEEMYAMTEVVTD
ILPEDKPRYLMGVGTPINILENIALGVDMFDCVMPTRNARNGMLFTAHGTINIKNLKWKDDFSPLDEMAITWVDTDYSKA
YVRHLFSVNERLAAQIATIHNLGFYMWLVREARKHILAGDFRTWKDTMVKQMDKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tgt AAT96105.1 Tgt Not tested T-PAI Protein 4e-70 49
tgt AAT96121.1 Tgt Not tested T-PAI Protein 4e-70 49
tgt AAT96069.1 Tgt Not tested T-PAI Protein 3e-70 49
tgt AAT96181.1 Tgt Not tested T-PAI Protein 3e-70 49
tgt AAT96041.1 Tgt Not tested T-PAI Protein 4e-70 49