Gene Information

Name : Geoth_1925 (Geoth_1925)
Accession : YP_004587966.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1838129 - 1838413 bp
Length : 285 bp
Strand : +
Note : KEGG: gmc:GY4MC1_1859 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria

DNA sequence : 
ATGGTTCGGGAAGCATTAGGTATGGTGGAGACAAAAGGGTTAGTTGCTGCTATTGAAGCGGCAGATGCAATGGTGAAAGC
GGCAAATGTGACACTTATCGGTTACCAGAAAATTGGTTCCGGGCTTGTCACGGTGATGGTCCGCGGCGATGTTGGCGCTG
TAAAAGCAGCAACGGATGCTGGTGCAGCAGCCGCGGAAAAAGTGGGGCAAGTCATATCCATTCATGTCATTCCAAGACCG
CACACAGAAGTGGAAGGAATTCTTCCTAAACTAGTTCAAGAATGA

Protein sequence : 
MVREALGMVETKGLVAAIEAADAMVKAANVTLIGYQKIGSGLVTVMVRGDVGAVKAATDAGAAAAEKVGQVISIHVIPRP
HTEVEGILPKLVQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-15 65
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1925 YP_004587966.1 microcompartments protein VFG1596 Protein 3e-15 65
Geoth_1925 YP_004587966.1 microcompartments protein VFG1598 Protein 1e-13 63
Geoth_1925 YP_004587966.1 microcompartments protein VFG1597 Protein 1e-13 63