Gene Information

Name : secD (EAE_12505)
Accession : YP_004592694.1
Strain : Enterobacter aerogenes KCTC 2190
Genome accession: NC_015663
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecD
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0342
EC number : -
Position : 2683231 - 2685078 bp
Length : 1848 bp
Strand : +
Note : COG0342 Preprotein translocase subunit SecD

DNA sequence :
GTGTTAAACCGTTATCCTTTGTGGAAGTACGTGATGCTGGTCGTCGTGATTATCGTCGGCCTGATTTACGCGCTTCCCAA
CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC
AGAAAACTTTACAAGAAGAAAAAATCACCGCGAAGTCTGTGGCACTGGAAGAGGGCGCAATTCTTGCGCGCTTCGACACC
ACCGACACTCAGCTGCGAGCGCGTGAAGCGCTGGTTAACCTGCTGGGTGACAAATACGTCGTGGCGCTAAACCTTGCTCC
TGCTACCCCGCGCTGGCTGGCGGCGATGTATGCCGAGCCGATGAAGCTGGGTCTTGACCTACGCGGCGGCGTGCACTTCC
TGATGGAAGTAGACATGGACACCGCATTAGGCAAACTGCAGGAACAAAACATCGATAGCCTGCGCAGCGAGCTGCGTGAC
AAAGGCATTCCTTACTCCACCGTGCGTAAGGAAGACAACTACGGTCTGAGCATCGTCTTCCGCGACAGCGCGGCGCGCGA
CCAGGCTATCTCTTATCTCAGCCCGCGCCATCGCGATCTGGTTATTTCAAGCCAGGGTAACAATGCGCTGAAAGCGGTGA
TGACCGACGAACGTCTGAAAGAAGCCCGTGAATACGCCGTTCAGCAGAACATCAACATTCTGCGTAACCGTGTAAACCAG
CTCGGCGTGGCCGAACCGCTGGTGCAGCGTCAGGGTTCCGACCGTATCGTGGTTGAACTGCCGGGTATCCAGGATACCGC
GCGTGCGAAGGAAATCCTTGGCGCGACCGCGACGCTGGAATTCCGTCTGGTGAACACCAACGTCGATCAGTCCGCAGCCG
CTTCTGGCCGCGTACCGGGCGATTCGGAAGTGAAAGATACCCGTGAAGGCCGTCCGGTGGTGCTGTATAAGCGCGTGATC
CTGACCGGCGACCATATCACTGACTCCACTTCCAGCATGGACGAGTACAACCAGCCGCAGGTTAACATCTCGCTCGATAG
CGCGGGTGGCAACATCATGTCTAACTTCACCAAGGACAATATCGGTAAACCGATGGCGACCCTGTTCGTGGAGTACAAAG
ACAGCGGTAAGAAAGATGCCAACGGTCGCGCTATCCTTGCGAAAGAGGAAGAGGTGATTAACATCGCCAATATCCAGTCT
CGCCTTGGCAATAGCTTCCGTATCACCGGTATCAGCAACCCGACCGAAGCGCGTCAGCTTTCTCTGCTGCTGCGTGCGGG
CGCCCTGATTGCGCCGATTCAGATCGTTGAAGAGCGTACTATCGGCCCAACTCTGGGTATGCAGAACATCAAGCAGGGCC
TGGAAGCGTGTCTGGCCGGTCTGGTGGTCTCTATCCTGTTCATGATCTTCTTCTATAAGAAGTTCGGCCTGATTGCGACT
TCCGCGCTGATTGCTAACCTGGTGCTGATTGTCGGCATTATGTCCCTGATTCCTGGGGCAACGCTGACCATGCCGGGTAT
CGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCTAACGTACTGATTAACGAGCGTATCAAAGAAGAGCTGAGCA
ACGGACGTACCGTTCAGCAGGCGATTGACGAAGGTTATAAGGGCGCATTTAGCTCTATCTTCGACGCCAACGTGACGACG
CTAATTAAGGTTATCATCCTGTACGCGGTCGGTACCGGTGCCATTAAAGGGTTTGCGATTACTACCGGTATCGGTATCGC
GACCTCAATGTTTACCGCTATCGTCGGCACCCGTGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCGTGAAAAAGCTGT
CTATCTGA

Protein sequence :
MLNRYPLWKYVMLVVVIIVGLIYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDT
TDTQLRAREALVNLLGDKYVVALNLAPATPRWLAAMYAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSELRD
KGIPYSTVRKEDNYGLSIVFRDSAARDQAISYLSPRHRDLVISSQGNNALKAVMTDERLKEAREYAVQQNINILRNRVNQ
LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQSAAASGRVPGDSEVKDTREGRPVVLYKRVI
LTGDHITDSTSSMDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKEEEVINIANIQS
RLGNSFRITGISNPTEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIAT
SALIANLVLIVGIMSLIPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYKGAFSSIFDANVTT
LIKVIILYAVGTGAIKGFAITTGIGIATSMFTAIVGTRAIVNLLYGGKRVKKLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secD AAT96103.1 SecD Not tested T-PAI Protein 2e-119 49
secD AAT96039.1 SecD Not tested T-PAI Protein 6e-119 49
secD AAT96067.1 SecD Not tested T-PAI Protein 6e-119 49
secD AAT96119.1 SecD Not tested T-PAI Protein 6e-119 49
secD AAT96179.1 SecD Not tested T-PAI Protein 4e-119 49