Gene Information

Name : Flexsi_0220 (Flexsi_0220)
Accession : YP_004602480.1
Strain : Flexistipes sinusarabici DSM 4947
Genome accession: NC_015672
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 233259 - 233459 bp
Length : 201 bp
Strand : +
Note : PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cte:CT0090 glycosy hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; SPTR: Glycosyl hydrolase, family 3

DNA sequence :
ATGGAATTAGGAACAGTCAAATGGTTTAGTGATGCAAAAGGATTTGGATTCATCACAAAAGAAAATGGTGATGATGTATT
CGTTCACTACACCGCAGTGCAAAAAGAAGGATTTAAAAGCCTTAGCGAAGGCGAAAAGGTTCAATTCGAAGTTGAAAAAA
CACCAAAAGGTGCTTCATCTGTAAACGTTCAGGAAGTATAA

Protein sequence :
MELGTVKWFSDAKGFGFITKENGDDVFVHYTAVQKEGFKSLSEGEKVQFEVEKTPKGASSVNVQEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-14 56