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Name : Mesop_4631 (Mesop_4631) Accession : YP_004613146.1 Strain : Mesorhizobium opportunistum WSM2075 Genome accession: NC_015675 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 4756760 - 4760896 bp Length : 4137 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR007121:IPR010243:IPR007644:IPR007642:IPR 007645:IPR019462:IPR007120:IPR007641; KEGG: mlo:mlr0276 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6 DNA sequence : ATGGCCCAGACCCAGACTTTCAATGGCCGCAGACGCGTACGCAAGTTCTTCGGAAAGATCCCGGAAGTTGCGGAGATGCC GAACCTGATCGAGGTTCAAAAGGCATCCTATGACCAGTTCCTGATGGTGGACGAGCCCAAGGGCGGACGTCCGGACGAGG GACTGCAGGCCGTTTTCAAGTCGGTCTTCCCGATCTCCGATTTTTCTGGCTCCTCGATGCTGGAGTTCGTGAAGTACGAG TTCGAAGGACCGAAATTCGACGTTGACGAATGCCGTCAGCGCGACCTGACCTATGCCGCGCCGCTGAAGGTGACGCTGCG CCTCATCGTGTTCGATATCGACGAGGATACCGGCGCCAAGTCGATCAAGGACATCAAGGAGCAGGACGTCTACATGGGCG ACATGCCGCTCATGACCTTGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGATGCACCGTTCG CCGGGCGTCTTCTTCGACCATGACAAGGGCAAGTCGCACTCGTCGGGCAAGCTTCTGTTTGCCGCGCGCGTCATTCCCTA TCGCGGCTCGTGGCTCGACATCGAGTTCGATTCCAAGGACGTCGTGCACGCCCGTATCGACCGCCGCCGCAAGATTCCGG TGACGTCGCTGCTGATGGCACTCGGCATGGACGGCGAAGAGATCCTGTCGACCTTCTACAACAAGATCACCTACAAGCGC GCCGGCGACCACTGGCGCATTCCGTTCAACGTCGAGCGTTTCCGCGGCCTCAAGGCCGTCGGCGACCTGGTCGACGCTGA TACGGGCGAGGTCGTTGTCGAAGCCGGCAAGAAGATCACCGCCCGTCAGGCCAGAGCGCTTGGCGAAAAGGGTCTCAAGG CGATCAAGGCGACCGACGAGGATCTGCTCGGCAACTACCTGGCCGAGGACATCGTCAACTACGCAACCGGCGAGATCTTC CTCGAAGCCGGTGACGAGATCGATGAAAAGACTCTCAAAGTGCTTCTCGGCACGGGCGAGAACGAGATCAAGGTCCTCGA CATCGACCATGTCAATGTCGGCGCCTATATCCGCAACACGCTCAACGTCGACAAGAACGAAAGCCGCCAGGACGCGCTGT TCGACATCTATCGTGTCATGCGCCCCGGCGAGCCGCCGACGCTCGAGACCGCCGAAGCCATGTTCAACTCGCTGTTCTTC GACAGCGAGCGCTATGATCTGTCGGCCGTCGGCCGCGTCAAGATGAACATGCGCCTCGAACTCAAGGCCGAGGACACCGT GCGCGTCCTGCGCAAGGACGACATCCTGGCCGTGGTCAGGACGCTTGTCGAACTGCGCGACGGCAAGGGCGAGATCGACG ACATCGACAATCTCGGCAATCGCCGCGTGCGCTCGGTCGGCGAGCTGATGGAGAACCAGTACCGCGTCGGCCTGCTGCGT ATGGAGCGCGCGATCAAGGAGCGTATGTCCTCGATCGAGATCGACACGGTGATGCCGCAGGACCTGATCAACGCCAAGCC GGCGGCCGCCGCCGTGCGCGAGTTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAGA TCACCCACAAGCGTCGCCTGTCGGCGCTTGGACCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTG CACCCGACGCATTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAATATCGGTCTGATCAACTCGCTGGCCAC TTTCGCACGTGTCAACAAGTACGGCTTCATCGAGAGCCCGTACCGCAAGATCGTCGACGGCAAGCTGACCAATGACGTCG TCTATCTCTCGGCGATGGAAGAAGCCAAGCACCACGTCGCGCAGGCCAACGCCGAGCTCGACAAGAATGGCGGCTTCGTC GACGAGTTCGTCATTTGCCGCAGCGCCGGCGAAGTGATGATGGCGCCGCGCGAAAACGTCGACTTGATGGACGTGTCGCC GAAGCAGATGGTGTCGGTGGCCGCGGCCCTGATCCCGTTCCTGGAAAACGACGACGCCAACCGCGCTCTGATGGGCTCGA ACATGCAGCGTCAGGCCGTGCCGCTGGTGCGCGCCGAAGCGCCGTTCGTCGGCACCGGCATGGAGCCGATCGTCGCCCGT GACTCCGGCGCCGCCATCGGCGCCCGCCGCGGCGGCATCGTCGACCAGGTGGACGCGACGCGTATCGTCATTCGCGCCAC CGAGGATCTCGATCCGGGCAAGTCCGGCGTCGACATCTACCGGTTGATGAAGTTCCAGCGTTCGAACCAGAACACCTGTA TCAACCAGCGTCCGCTGGTGCGCATGGGTGACCGGGTCAACAAGGGCGACATCATCGCCGACGGTCCCTCGACCGAGCTC GGCGATCTGGCGCTCGGCCGCAACGTGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACTCGATCCTGCT CTCCGAGCGCATCGTCGCCGACGACGTCTTCACTTCGATCCACATCGAGGAGTTCGAGGTCATGGCGCGCGATACCAAGC TCGGTCCGGAGGAAATCACGCGCGACATTCCGAACGTTTCGGAAGAAGCGCTGAAGAACCTCGACGAAGCCGGCATCGTC TACATCGGCGCGGAAGTGCAGCCTGGCGATATCCTGGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGA AGAGAAGCTTCTGCGCGCCATCTTCGGTGAAAAGGCCTCCGACGTGCGCGACACCTCGATGCGCATGCCTCCGGGCACCT TCGGCACCGTCGTCGAGGTGCGCGTGTTCAATCGCCACGGTGTGGAGAAGGACGAGCGCGCCATGGCGATCGAACGCGAG GAGATCGAACGCCTCGCCAAGGACCGTGACGACGAACAGGCCATCCTGGACCGCAACGTCTACGCGCGTCTTTCCGACGT GCTCGTCGGCAAGGAAGCGATTGCTGGACCGAAGGGCTTCAAGAAGGGCTCGACGCTGTCCAAGGACACGCTCGACGAGT ATCCGCGTTCGCAGTGGTGGCAGTTTGCCGTGGAGAACGAAAAGCTCCAGAGCGAACTGGAAGCCCTGCGTGGCCAGTAC GACGACTCCAAGAAGGCGCTCGAGCAGCGCTTCATGGACAAGGTCGAGAAGGTGCAGCGCGGCGATGAAATGCCTCCGGG CGTCATGAAGATGGTCAAGGTCTTCGTGGCCGTGAAGCGCAAGATGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCA ACAAGGGTGTCGTGTCGCGCATCGTTCCGGTCGAGGACATGCCTTTCCTCGAGGACGGCACGCATGCCGATATCGTGCTC AACCCGCTGGGTGTGCCGAGCCGCATGAATGTCGGTCAGATCCTGGAAACGCATCTGGGCTGGGCTTGTGCGGGCATGGG CAGGAAGATCGGCGAGCTGATCGACACGTATAAGGCGGCCGGTGATATCAAGCCGCTGCGCAAGACGCTCGAGAGCTTCA TGCCGGCCAACGACCGCAACGAGCCGGTCCGCGAGTATGACGACGAGAGCATTGTTCGCCTCAGCGAGCAGATGCGTCGC GGCGTCTCGATCGCGACCCCGGTGTTCGACGGCGCGCACGAGGCTGACATCAACATCATGCTGGAGCAGGCGGGCCTGCA TACCAGCGGTCAGTCGCAGCTCTATGACGGACGCACCGGCGAGCCGTTCGATCGCAAGGTGACGATGGGCTATATCTACA TGCTCAAGCTTCACCACCTGGTGGACGACAAGATCCACGCGCGTTCGATCGGTCCGTACTCGCTCGTCACCCAGCAACCG CTGGGCGGCAAGGCGCAGTTCGGTGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCGCTGGAAGCCTATGGCGCCGCCTA CACGCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTCGCCGGCCGTACCAAGGTCTACGAGGCGATCGTCCGCGGCG ACGACACCTTCGAGGCCGGCATCCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGGTCTCTCGGCCTCAATGTCGAG CTGGAGAACACCAAGCTCGACGACAACCCGATCCGGCTGCCCGATGCTGCCGAATAG Protein sequence : MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPKGGRPDEGLQAVFKSVFPISDFSGSSMLEFVKYE FEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAKSIKDIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRS PGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKITYKR AGDHWRIPFNVERFRGLKAVGDLVDADTGEVVVEAGKKITARQARALGEKGLKAIKATDEDLLGNYLAEDIVNYATGEIF LEAGDEIDEKTLKVLLGTGENEIKVLDIDHVNVGAYIRNTLNVDKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFF DSERYDLSAVGRVKMNMRLELKAEDTVRVLRKDDILAVVRTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLR MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDV HPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVDGKLTNDVVYLSAMEEAKHHVAQANAELDKNGGFV DEFVICRSAGEVMMAPRENVDLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR DSGAAIGARRGGIVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLVRMGDRVNKGDIIADGPSTEL GDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIV YIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE EIERLAKDRDDEQAILDRNVYARLSDVLVGKEAIAGPKGFKKGSTLSKDTLDEYPRSQWWQFAVENEKLQSELEALRGQY DDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVL NPLGVPSRMNVGQILETHLGWACAGMGRKIGELIDTYKAAGDIKPLRKTLESFMPANDRNEPVREYDDESIVRLSEQMRR GVSIATPVFDGAHEADINIMLEQAGLHTSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQP LGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVE LENTKLDDNPIRLPDAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 59 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 60 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 59 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 58 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 58 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 57 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 57 |
| Mesop_4631 | YP_004613146.1 | DNA-directed RNA polymerase subunit beta | AM180355.1.gene120.p | Protein | 0.0 | 49 |
