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Name : Mesop_5375 (Mesop_5375) Accession : YP_004613885.1 Strain : Mesorhizobium opportunistum WSM2075 Genome accession: NC_015675 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 5484784 - 5486769 bp Length : 1986 bp Strand : - Note : COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR003568:IPR003567:IPR002541; KEGG: mlo:mlr7690 cytochrome c-type synthesis protein CycK; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-t DNA sequence : ATGGTTGAGACCGGACATTTCGCCCTGGTCCTGGCATTCGCGCTTTCGCTGGTGCAGACGATCGTGCCGCTGTTTGGCGC GCGCCTGAACAACCAGCGCCTGATGGCTGTCGGTGGCCCGGTCGCGGTGACCGGTTTTGCGTTGACGGCACTGTCTTTCG TCGCGCTGGCCAGCGCTTATGCGAATTCCGACTTCTCGGTGGCGAGCGTCTGGGAAAACTCGCATTCGTTGCAGCCGCTG ATCTACAAGATCACCGGAACCTGGGGCAACCACGAAGGCTCGATGCTGCTCTGGGTGCTGATCCTGACCTTTTTCGGCGC GCTTGTCGCCGCTTTCGGCTCCAACCTGCCGGCAACGCTGCGGGCCAATGTCCTGGCCGTGCAGGGCGCCATCGGCGCTA CCTTCTTCCTGTTCATCCTGGCGACGTCCAATCCGTTCATCCGGCTCAATCCGGCGCCGATCGAGGGCCGCGATCTCAAC CCGGTCCTGCAGGATCTCGGCCTCGCCATTCACCCGCCGCTGCTCTATCTCGGTTACGTCGGTTTCTCGATCTGCTTTTC CTTCTCGGTCGCGGCCCTCATCGAAGGTCGTATCGATGCCTCCTGGGCGCGCTGGGTGCGGCCATGGACGCTGGTCGCCT GGATGTTCCTGACTGGCGGCATCGCCATGGGATCGTACTGGGCCTACTACGAACTCGGCTGGGGCGGCTTCTGGTTCTGG GATCCGGTCGAGAACGCCTCCTTCATGCCGTGGCTGGCAGGCACCGCGCTGCTCCATTCGGCCATCGTCATGGAAAAGCG TTCGGCCTTGAAGATCTGGACGCTGCTGCTTGCCATCCTCACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGCGCT CGGGCGTCCTGACCTCCGTCCATGCCTTCGCCACCGATCCGACGCGCGGCATCTTCATCCTGTGCATATTGACGCTGTTC ATCGGCGGCTCGCTGTCGCTGTTTGCGTTGCGCGCCTCGAAGCTGACGGCCGGCGGCCTGTTCCATCCGATTTCGCGCGA AGGCGCGCTCGTCCTCAACAATCTGTTCCTGACGACGGCGACCGCCACCGTGCTCGTTGGCACCCTCTATCCGCTGGTGG TCGAAGCCTTTTCCTCGGACAAGATTTCGGTCGGAGCACCATTCTTCAACCTGACCTTCGCGCCACTGATGGTACCCCTG CTGGTGATGGTTCCCTTTGGGCCGCTGCTAGCCTGGAAACGCGGCGATGTCTTCGCGGTCGCGCAGCGCCTGATGGTGGC ATTCGCGGGTGCCCTCCTGACGGCACTGGTCACCACTCTGTTCATCGACGGCGCTTCGGTATTGGCGGCCATTGGGGTCG GACTTGCCGTCTGGCTGATCCTTGGTGCGCTCACCGACATCGCCGTCAAGGCGGGGTTCGGCAATGTCACGACGGGGAAC ATGGTCCGGCGCCTGCTTGGCTTGCCGCGCTCGGTCTTCGGCACGGCTTTCGCCCATCTCGGCCTTGGCCTGACCACGCT GGGCATTGTCGGCACGCTTTGCTTCGGTACCGAGAAAATCCTGTCGATGCATGCCGGCGAGACGGTGGAATTGTCCGGCC ACACGCTGCGTTTCGTCGGGCTCTATCCGGCCCAGGGCCCCAACTACAGCGAAGATCGCGGCCGCTTCGAGCTGATCGGT GTCAGCGGCAGTCCCATCGGCGAAATCAGCTCGGCCAAGCGCTTCTTTCCGGTGCGGCAGACGACGACGACGGAATCCGG CATCAAGACCCTTGGTCTTTCCCAGCTCTACATTTCGCTCGGTGACGAAGGCAAGGATGGCTCCGTCGTGGTGCGCTTGT GGTGGAAGCCGCTGGTGACGCTGATCTGGGGCGGCGGCCTGATGATGATGGCGGGCGCGGCCATGTCGCTGATGGACAGG CGCTTGCGGGTCGGAGCACCCTCGCGGCGCCGCAAGACGGCGGTGGCGCCAGCGGGCCTGCCATGA Protein sequence : MVETGHFALVLAFALSLVQTIVPLFGARLNNQRLMAVGGPVAVTGFALTALSFVALASAYANSDFSVASVWENSHSLQPL IYKITGTWGNHEGSMLLWVLILTFFGALVAAFGSNLPATLRANVLAVQGAIGATFFLFILATSNPFIRLNPAPIEGRDLN PVLQDLGLAIHPPLLYLGYVGFSICFSFSVAALIEGRIDASWARWVRPWTLVAWMFLTGGIAMGSYWAYYELGWGGFWFW DPVENASFMPWLAGTALLHSAIVMEKRSALKIWTLLLAILTFSLSLLGTFLVRSGVLTSVHAFATDPTRGIFILCILTLF IGGSLSLFALRASKLTAGGLFHPISREGALVLNNLFLTTATATVLVGTLYPLVVEAFSSDKISVGAPFFNLTFAPLMVPL LVMVPFGPLLAWKRGDVFAVAQRLMVAFAGALLTALVTTLFIDGASVLAAIGVGLAVWLILGALTDIAVKAGFGNVTTGN MVRRLLGLPRSVFGTAFAHLGLGLTTLGIVGTLCFGTEKILSMHAGETVELSGHTLRFVGLYPAQGPNYSEDRGRFELIG VSGSPIGEISSAKRFFPVRQTTTTESGIKTLGLSQLYISLGDEGKDGSVVVRLWWKPLVTLIWGGGLMMMAGAAMSLMDR RLRVGAPSRRRKTAVAPAGLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-99 | 46 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-85 | 45 |
