|
Name : glcD (Rta_36670) Accession : YP_004620801.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit glcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3897200 - 3898627 bp Length : 1428 bp Strand : + Note : - DNA sequence : TTGCAGGCCGTGCTGCCGCACGGCGCCCTGCTGTGGAACGCCGAAGACACCACGCCCTACGAATGCGACGGCCTGACCGC CTACCGCCAGCGGCCGCTGGTGGTGGCGCTGCCCGAGACCGAGGCCCAGGTGCAGGCCGTGCTGCAGGCCTGCCATGCCC TGGCCGTGCCGGTGGTGGCGCGCGGCGCGGGCACCGGGCTGTCCGGCGGCGCCATGCCGCATGCGCTGGGCGTGACGCTG TCGCTGGCCAGGTTCAACCGCATCCTGGCCGTCGATCCGGCCAGCCGCACGGCGCGGGTGCAGTGCGGCGTGCGCAACCT GGCGATCAGCGAGGCGGCCGCGCCGCACGGCCTGTACTACGCGCCGGACCCGTCCAGCCAGATCGCCTGCACCATCGGCG GCAACGTGGCCGAGAACTCCGGCGGCGTGCACTGCCTCAAGTACGGGCTGACGCTGCACAACGTGCTCAAGGTGCGCGGC TTCACGGTGGAAGGCGAGCCGGTGGAGTTCGGCGGCGAGGCGCTGGACGTGCCGGGCTACGACCTGCTGTCGGTGCTGGT GGGCAGCGAGGGCATGCTGGCCGTGACGACCGAGGTGACGGTGAAGCTGGTGCCCAAGCCCCTGCTGGCGCGCTGCATCA TGGCCAGCTTCGACGACCTGCGCAAGGCCGGCGACGCGGTGGCCGCGGTGATCGCCGCCGGCATCATCCCGGCGGGGCTG GAGATGATGGACAAGCCCATGACGGCCGCCGTCGAGGACTTCGTCCACGCCGGCTACGACCTCGCGGCCGAGGCCATCCT GCTGTGCGAGAGCGACGGCACGCCCGAGGAGGTGGAAGAAGAGATCGGCCGCATGAGCGAGGTGCTGCGCGCCGCCGGCG CCATCGCCATCGCCGTCAGCCGCGACGAGTCCGAGCGGCTGCGTTTCTGGAGCGGGCGCAAGAACGCCTTCCCCGCCTCG GGCCGCATCAGCCCCGACTACATGTGCATGGACTCGACCATCCCGCGCAAGCGGCTGGCCGACATCCTGCTGGCGATCCA GGCCATGGAGAAGAAGTACGGCCTGCGCTGCGCCAACGTGTTCCATGCCGGTGACGGCAACCTGCACCCGCTGATCCTGT TCGACGCCAACGACCCGGACCAGCTGCATCGCTGCGAGCTGTTCGGCGCCGACATCCTGGAGACCAGCGTGGCCATGGGC GGCACGGTAACGGGCGAGCACGGCGTGGGCGTGGAGAAGCTCAACTCCATGTGCGTGCAGTTCAGCCCCGAGGAGCGCGA GCAGATGTTCGGCGTCAAGCGTGCCTTCGATCCCCGGGGGCTGCTCAATCCCGGCAAGGTGATCCCCACCCTGAACCGCT GCGCCGAGTACGGCAAGATGCTGGTGCGCGCCGGGCGCATCGCGCACCCGGAACTGCCGCGCTACTGA Protein sequence : MQAVLPHGALLWNAEDTTPYECDGLTAYRQRPLVVALPETEAQVQAVLQACHALAVPVVARGAGTGLSGGAMPHALGVTL SLARFNRILAVDPASRTARVQCGVRNLAISEAAAPHGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTLHNVLKVRG FTVEGEPVEFGGEALDVPGYDLLSVLVGSEGMLAVTTEVTVKLVPKPLLARCIMASFDDLRKAGDAVAAVIAAGIIPAGL EMMDKPMTAAVEDFVHAGYDLAAEAILLCESDGTPEEVEEEIGRMSEVLRAAGAIAIAVSRDESERLRFWSGRKNAFPAS GRISPDYMCMDSTIPRKRLADILLAIQAMEKKYGLRCANVFHAGDGNLHPLILFDANDPDQLHRCELFGADILETSVAMG GTVTGEHGVGVEKLNSMCVQFSPEEREQMFGVKRAFDPRGLLNPGKVIPTLNRCAEYGKMLVRAGRIAHPELPRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-131 | 62 |
