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Name : Rta_36970 (Rta_36970) Accession : YP_004620832.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3927731 - 3929581 bp Length : 1851 bp Strand : - Note : - DNA sequence : GTGATCGCGCTGCTGGTGGGCATCGTCTACACGCTGCCCAATTTCTTCGGCGAGGCCCCGGCGGTGCAGGTGTCCTCGGC CAAAGCCACCGTGAAGGTGGACGCGACCACGCTGGCGCGGGTCGAGCAGGCGCTGTCGGCCGCGGGCATCCAGCCCGAGA GCACCACCCTGGACGCCAGCTCCGTCAAGGTGCGCCTGGACAGCACCGACACGCAGCTGCGCGCCCGCGACGCGCTGCAG AAGGCTTTGGTGCCCGACCCTGCCGACCCGCCCTACGTGGTGGCGCTGAACCTGCTGTCGGCCTCGCCGCGCTGGCTGTC GGCCCTGGGCGCCGCGCCCATGTACCTGGGCCTGGACCTGCGCGGCGGCGTGCATTTCATGCTGCAGGTGGACATGCAGG GCGCGCTGACCAAGAAGGCCGAGTCCTTCGCCGGCGACCTGCGCACCCAGCTGCGCGAGGCCAACATCCGGCATGCCGGC ATCAGCCGTGATGGCCAGGCCGTGCAGGTGCGCTTTCGCGACGGCCAGTCGATGGAGGCGGCACGCCGCGTGGTCGCCGA CCAGTTCCCGGACCTGCAGGTGGCCGAGTCGACCGCCGGCACCGACTACCTGCTGACCGCGACCATCCGGCCCGAGGCGG CCCGGCGGGTGCAGGAGCAGGCCCTCAAGCAGAACATCCTGACGCTGCACAACCGCATCAACGAACTGGGCGTGGCCGAG CCGGTAATCCAGCAGCAGGGCCTGGACCGCATCGTGGTGCAGCTGCCCGGCGTGCAGGACACGGCCAAGGCCAAGGACAT CCTGGGGCGCACCGCCACGCTGGAGATGCGCCTGGTGGACGAGAGCGCCGAGGCGCGGGCCGCCGAGCTGGGCACCGGCC CGGTGCCGTTCGGCTCCGAGCGCTTCCTCGAGCGCGACGGCCGGCCGGTGATCGTGAAGAAGCAGGTCATCCTCACCGGC GACAGCCTGACCGACGCCCAGCCGGGCTTCGATTCCCAGACCCAGCAGCCCAAGGTGGACCTCACGGTGGACGCCAAGGG CGGCCGCATCATGCGCGACACCAGCCGCGAGAACGTGGGCAAGCGCATGGCCATCCTGCTGTTCGAGAAGGGCCGCGGCG AGGTGCTCACGGCGCCGGTGATCCAGAGCGAGCTGGGCAACCGGTTCCAGATCTCGGGCTCGATGACGGTGAACGAGGCC AACGACCTGGCCCTGCTGCTGCGCGCCGGCTCGCTGGCCGCGCCCATGGAGATCATCGAGGAGCTCACCATCGGGCCGAC GCTGGGCGCCGAGAACATCGCCAAGGGCTTCCACAGCGTGGCCTGGGGCTTCGCCGCCATCGTCGCGTTCATGGCCGTCT ACTACGCGCTGTTCGGCCTGTTCTCCGGGCTGGCGCTGGCCGTCAACCTGCTGCTGCTGGTGGCCATCCTGTCCATGCTG CAGGCCACCCTGACGCTGCCGGGCATGGCCGCGATGGCGCTGGCGCTGGGCATGGCGATCGACTCCAACGTGCTGATCAA CGAGCGGGTGCGCGAGGAGCTGCGCAACGGCGTCTCGCCGCAGGCGGCCATCCATGCCGGCTACGACCGAGCCTGGGCCA CCATCCTGGACTCCAACATCACCACCCTGATCGCCGGCGTCGCCCTGCTGGCCTTCGGCTCCGGGCCGGTGCGCGGCTTC GCCGTGGTGCACGTGATCGGCATCCTGACCTCCATGTTCTCGGCCGTGTTCTTCTCGCGCGGGCTGGTCAACCTGTGGTA CGGCCGCCAGAAGAAGCTCAAGTCGGTCTCCATCGGCACGGTCTGGCGGCCGGGCGCGGATGGCGCTATAACCAAGGCTG AGGGCCGCTGA Protein sequence : MIALLVGIVYTLPNFFGEAPAVQVSSAKATVKVDATTLARVEQALSAAGIQPESTTLDASSVKVRLDSTDTQLRARDALQ KALVPDPADPPYVVALNLLSASPRWLSALGAAPMYLGLDLRGGVHFMLQVDMQGALTKKAESFAGDLRTQLREANIRHAG ISRDGQAVQVRFRDGQSMEAARRVVADQFPDLQVAESTAGTDYLLTATIRPEAARRVQEQALKQNILTLHNRINELGVAE PVIQQQGLDRIVVQLPGVQDTAKAKDILGRTATLEMRLVDESAEARAAELGTGPVPFGSERFLERDGRPVIVKKQVILTG DSLTDAQPGFDSQTQQPKVDLTVDAKGGRIMRDTSRENVGKRMAILLFEKGRGEVLTAPVIQSELGNRFQISGSMTVNEA NDLALLLRAGSLAAPMEIIEELTIGPTLGAENIAKGFHSVAWGFAAIVAFMAVYYALFGLFSGLALAVNLLLLVAILSML QATLTLPGMAAMALALGMAIDSNVLINERVREELRNGVSPQAAIHAGYDRAWATILDSNITTLIAGVALLAFGSGPVRGF AVVHVIGILTSMFSAVFFSRGLVNLWYGRQKKLKSVSIGTVWRPGADGAITKAEGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-82 | 41 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-81 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-82 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-82 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-82 | 41 |
