Gene Information

Name : TOPB45_1580 (TOPB45_1580)
Accession : YP_004628586.1
Strain : Thermodesulfobacterium geofontis OPB45
Genome accession: NC_015682
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1587591 - 1587845 bp
Length : 255 bp
Strand : +
Note : KEGG: tna:CTN_0870 cold shock-like protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTTTAGAGGTAAAGTAAAGTGGTTTGATGAGAAGAAGGGTTACGGTTTCATTTCCAAGGAAGATGGCGGAGATGTCTT
TGTACATTACTCTGCCATCGAAATGCCAGGTTTCAAAACCCTTAGGGAAGGTCAGACTGTAGAATTTGAAGTAGTTCAAG
GTCCTAAGGGAGAACAGGCTTCCAAGGTTAGAGTTTTAGATGCAGGTACTCCCAGAAGATCTCAAAGAAAACCTTCCAGA
AGAGAACAGAGCTAA

Protein sequence :
MFRGKVKWFDEKKGYGFISKEDGGDVFVHYSAIEMPGFKTLREGQTVEFEVVQGPKGEQASKVRVLDAGTPRRSQRKPSR
REQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-13 59