Gene Information

Name : TOPB45_0236 (TOPB45_0236)
Accession : YP_004627278.1
Strain : Thermodesulfobacterium geofontis OPB45
Genome accession: NC_015682
Putative virulence/resistance : Unknown
Product : cysteine desulfurase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : 2.8.1.7
Position : 224394 - 225515 bp
Length : 1122 bp
Strand : -
Note : KEGG: dth:DICTH_0557 aminotransferase, class V superfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase

DNA sequence :
ATGAAAAATATAATTTATTTAGACTACAATGCTACAACACCTGTCTTACCAGAAGTTATAGAGGAATTTAAACTATATTC
AGTTGAATATTTTGCTAATCCAAGTTCTGCTCATATTTTTGGAAAATTTGTAAGAGAAAAATTAGAAGAATTTCGTAAAA
AAGTAGCAGATTTAATTAATGCAGAGCCAGAAGAAATAATTTTTACCTCTGGAGGAACAGAATCTAACCACCTTGCCTTA
TATGGAGTTGCCTTTTCTAAAGGAAAAGGGCACATTTTAGTTAGTGCCTTTGAACATCCCTCAGTTTTAAATCCAGCAGT
AAAACTTTTAGAAATGGGTTTTCAAGTAGATTTTATCCCTGTTAATTCTTATGGATATGTAGAACCAGATGAGGTCAAAA
GGCGTTTAAAATCTAATACTATACTTGTTTCTGTAATGATGGCTAACAATGAAATAGGAACTATTCAACCTGTTAAAGAA
ATAGCAGAAATTTGTAAGGAAAGGGAAATTTATTTTCATACAGATGCATGTCAAGCAGTAGGGAAAATAGCTGTAGATGT
TAAAGAAATAGGATGTAGTCTATTAAGTATAGCAGGACATAAAATGTATGCACCTAAAGGGATAGGGGCTCTATATATTA
AAAATGGAGTAAAAATAGAACCTTTATTTTTAGGAGGTGGGCAAGAAAGAGGTTTAAGGGCAGGAACAGAAGCAGTTGCT
TTAATTTCAGCTTTAGCCAAAGCTTCTGAAATAGCTCTAAGGGATTTAAATGCAGAAGGGGAAAGACTAATTTTTTTAAG
AGAAAAACTTTTCCAAGGGCTTAAAGAAATTTATCCTAAACTTTATCGCTACGGAATCCCTGAAAAAACTTTACCTAATA
CTTTAACAGTTTCTTTTGTTGGAAAAAATGGTGCAAAAATACTTTCTGAGCTTAAAGAAATATGTGCCTCAACTGGATCT
GCATGTCATGACAGAAAAGGTTCTCACACACTTTTAGCTTTAAAAGTGCCACAAGAATTAGCTGAAGGAACTGTAAGATT
TTCCTTAGGAAGATATACTTCTTTAGAGGATATAGAAAAGACTTTGCAGATCTTTTCCAAATATTTCAAAAATAATGTTT
AA

Protein sequence :
MKNIIYLDYNATTPVLPEVIEEFKLYSVEYFANPSSAHIFGKFVREKLEEFRKKVADLINAEPEEIIFTSGGTESNHLAL
YGVAFSKGKGHILVSAFEHPSVLNPAVKLLEMGFQVDFIPVNSYGYVEPDEVKRRLKSNTILVSVMMANNEIGTIQPVKE
IAEICKEREIYFHTDACQAVGKIAVDVKEIGCSLLSIAGHKMYAPKGIGALYIKNGVKIEPLFLGGGQERGLRAGTEAVA
LISALAKASEIALRDLNAEGERLIFLREKLFQGLKEIYPKLYRYGIPEKTLPNTLTVSFVGKNGAKILSELKEICASTGS
ACHDRKGSHTLLALKVPQELAEGTVRFSLGRYTSLEDIEKTLQIFSKYFKNNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 8e-57 41