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Name : shiA1 (OCA5_c13260) Accession : YP_004632283.1 Strain : Oligotropha carboxidovorans OM5 Genome accession: NC_015684 Putative virulence/resistance : Unknown Product : shikimate transporter ShiA Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2211 EC number : - Position : 1427438 - 1428763 bp Length : 1326 bp Strand : + Note : - DNA sequence : ATGGCGGATAAAGCACTTTTAAAACGTGTCGTCTTCGCATCTTTGATCGGAGCGACCGTGGAATGGTACGATTTCTTTCT CTACGGCGTCGTCGCCGGAATCGTCTTCAATCATCTGTATTTTCCGTCGCATGACATCTTGGTCTCGACGATGCTGGCCT ACACGACCTTCGCGGTCGGCTTCGTCACCCGTCCGCTTGGTGGCGTGATCTTCGGCCACTTCGGCGATCGTATCGGCCGC AAGAGCATGCTCATCCTGACGCTGATGATCATGGGTGTCGCGACGTTCCTGATCGGTCTGGTGCCGACCTATGACCAGAT TGGTATCTGGGCGCCGATCGCATTGCTCGTGCTGCGCATTCTGCAGGGCATCGGCCTTGGCGGTGAATGGGGCGGCGCGG TGCTGATGACGTATGAATATGCCGAGCCGCACAAGCGCGGCCTCTACGCCAGCCTGCCGCAGATCGGCCTGTCGATCGGC CTGTGCCTCGCCTCCGGCGTGGTGGCGCTGTTGTCGTACTCGCTGACCAACGAGCAATTTCTGGCGTGGGGCTGGCGTAT CGCCTTCGTGTTGAGCTTCGTGCTGGTGCTGGTCGGCCTTTATATTCGCCTCAACATCATGGAGACGCCCGAGTTCTCCA AGCTCAAGGAGAGCCGCAAAGAGGTGCAGGTGCCTTTCGCCACCATGATCAAGGATTATCCGAAGGAGATCCTGGCAGGC ATGGGCGCGCGCTACATCGATGGTGTGTTTTTCAACATCTTCGGTGTGTACTCGATTGCCTATCTCACCTCGCAGCTCAA GATTCCGCGCACCGAGGCGCTGCTGGGCGTTTGTGCCGCCGCGCTCATCATGTGTATTTTCATTCCGTACTTTGGCCGGG TCTCCGATCGCGTCGGCCGAACCCGGACTTACGCCTGGGGCTCGTTGATCACCGGTCTCTCCGCGCTGCCTGCGTTCTAT ATCTGGATGACGTATCCGGATCAGCCGATGGCGGTGTGGGCGGCGTTGATCATTCCGTTCGGAATTCTCTACGCGTCGGT CTACGGCCCCGAAGCCTCGCTGTTCTGCGATCTGTTCGGGCCCGAGGTGCGCTACACCGGCATTTCGTTCGTGTATCAAT TCTCCGGAATTTTCGCGAGCGGCCTGACCCCGATCATCGCCACGGCGTTGATGCAGTATTACGGCCCGCAGAACGGAGCG TGGGCGGTCGCCTGGTATGCCGTCTTTGCCGGCGTCGTCAGCGCGCTGTCGGCGATGTGGATCGCGCGTCTGGCGCGACA ACGCATTCAGGCGGGCGGGACAGCACCTGCCGCGCTGGTCGCGTAA Protein sequence : MADKALLKRVVFASLIGATVEWYDFFLYGVVAGIVFNHLYFPSHDILVSTMLAYTTFAVGFVTRPLGGVIFGHFGDRIGR KSMLILTLMIMGVATFLIGLVPTYDQIGIWAPIALLVLRILQGIGLGGEWGGAVLMTYEYAEPHKRGLYASLPQIGLSIG LCLASGVVALLSYSLTNEQFLAWGWRIAFVLSFVLVLVGLYIRLNIMETPEFSKLKESRKEVQVPFATMIKDYPKEILAG MGARYIDGVFFNIFGVYSIAYLTSQLKIPRTEALLGVCAAALIMCIFIPYFGRVSDRVGRTRTYAWGSLITGLSALPAFY IWMTYPDQPMAVWAALIIPFGILYASVYGPEASLFCDLFGPEVRYTGISFVYQFSGIFASGLTPIIATALMQYYGPQNGA WAVAWYAVFAGVVSALSAMWIARLARQRIQAGGTAPAALVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-56 | 41 |
