Gene Information

Name : ccmF (OCA5_c14880)
Accession : YP_004632445.1
Strain : Oligotropha carboxidovorans OM5
Genome accession: NC_015684
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 1602564 - 1604549 bp
Length : 1986 bp
Strand : +
Note : -

DNA sequence :
ATGATCGTCGAAGGCGGCCATTATGCGCTGGTGCTGGCGCTCGCCCTTGCACTGATCCAGTCGGTGGTGCCGCTGATCGG
CGCCCGCATCAACGATCCTGCGCTGATGAACGTGTCGCGCTCCACCGCGCTCGCACAGTTCGCGTTCGTGCTGATCTCGT
TCGTTGCGCTGATCTCGCTGCATGTTCTGTCGGATTTCTCCGTCGCCAACGTCTACGAGAATTCGCACTCGCTGAAGCCG
CTGATCTACAAGATCACCGGCGTCTGGGGAAATCATGAAGGCTCGATGCTTTTGTGGGTGTTCATCCTCGCGTTGTTCGG
CGCGATGGTCGCACTGTTCGGCGTCAACCTGCCGCCCTCGCTGCGCGCGCATGTGCTCGCGGTGCAGGGATGGATCGCGA
CCGCGTTCTATCTTTTCATCCTGCTGACCTCGAATCCGTTCCTGCGGATCGCACGTCCGCCGATCGAGGGCCGCGACCTC
AATCCCGTGCTGCAGGACCCCGGCCTCGCGCTGCATCCGCCGATGCTTTATCTCGGCTATGTCGGGTTTTCGATTTCTTT
TTCCTTCGCTATCGCCGCCCTGATCGAGGGTCGCATCGATGCCGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTGATGG
CGTGGATCTTCCTCACCCTCGGTATCGCGATGGGCTCCTACTGGGCCTATTACGAACTTGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTCGAGAACGCGTCCCTGATGCCGTGGCTCGCCGGCACCGCGCTGCTGCACTCCGCGGTGGTGATGGAAAA
GCGCGAGGCGCTGAAAATCTGGACCGTGCTGCTTGCGATCCTCACCTTCTCGCTGTCGCTCCTCGGCACATTTCTCGTGC
GCTCGGGCGTGCTCACCTCGGTCCATGCGTTTGCGACCGATCCCACCCGCGGCGTCTTCATCCTCATTATCCTTTGCGTC
TTCATCGGCGGCAGCCTGACGTTCTATGCGTGGCGCGCGGCCTCGCTGAAGCAGGGCGGGCTGTTCGCGCCGATCTCGCG
TGAAGGCGCGCTCGTCCTCAACAATCTGTTGCTGACGACGGCCTGCGCCACCGTGTTCGTCGGAACACTGTATCCGCTGG
CGCTCGAGGTGTTGACCGGCGCCAAGATTTCCGTCGGCGCGCCGTTCTTCAATCTCACCTTTGCGCCGCTGTTCGTGCCG
CTTCTTGTCGCCGTGCCGTTCGGCCCATTGCTCGCCTGGAAGCGCGGCGATCTTCCGGGCGCGATGCAGCGTCTGATGAT
GGCGGGCGTCGTTTCTCTTGTGACCATTGCCATCGTCTGGGCATGGCAGAGCGGCGGGGCTGCGCTCGCGCCGTTCGCGA
TCGGGCTTGCGGTGTTCGTGGTGCTCGGCGCGATCGTCGACATCGCGGAGCGCGTGAAGCTGTTTCAGGCGTCGTTCAAC
ACCTCATGGCACCGCGCCAAGGGCCTGCCGCGTTCCGCGTGGGGCACGGCGTTCGCGCATGCGGGCCTTGGCATCGCGCT
GATCGGCATCGTCTGCGAGTCGACATGGAACATCGAGCACATCGCAACGATGCGCCCGAACGACACCGCGCAGCTCGGCG
CCTACAGCGTGACGTTCAACGGTTTGAGAGCGCAGCAGGGTCCGAACTATCGCGAGGATATCGCAGCGTTCACTATCCGC
AGCGATGACCGCGTGGTCGGCACCATGACGCCCTCGAAGCGCAATTTCTCAACCCGCGGCATGGCGACGAGCGAGGCGGC
GCTGCTGACGCGTGGCGCGAGCCAGCTCTATATCTCGCTCGGCGCGGCGGAGGCCGATGGCTCGATCACCGCGCGGATCT
ACTACAAGCCGCTGGTGCTGCTGATCTGGTTCGGTCCGATCCTGATGGCGTTCGGCGGCATGCTGTCGCTGTCCGATCGC
CGCCTGCGCGTCGGCGCGCCGAAGCCCGCGCGCGCCAAGCTCGGCGTTCCGCAGCCTGCGGAGTAG

Protein sequence :
MIVEGGHYALVLALALALIQSVVPLIGARINDPALMNVSRSTALAQFAFVLISFVALISLHVLSDFSVANVYENSHSLKP
LIYKITGVWGNHEGSMLLWVFILALFGAMVALFGVNLPPSLRAHVLAVQGWIATAFYLFILLTSNPFLRIARPPIEGRDL
NPVLQDPGLALHPPMLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF
WDPVENASLMPWLAGTALLHSAVVMEKREALKIWTVLLAILTFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILIILCV
FIGGSLTFYAWRAASLKQGGLFAPISREGALVLNNLLLTTACATVFVGTLYPLALEVLTGAKISVGAPFFNLTFAPLFVP
LLVAVPFGPLLAWKRGDLPGAMQRLMMAGVVSLVTIAIVWAWQSGGAALAPFAIGLAVFVVLGAIVDIAERVKLFQASFN
TSWHRAKGLPRSAWGTAFAHAGLGIALIGIVCESTWNIEHIATMRPNDTAQLGAYSVTFNGLRAQQGPNYREDIAAFTIR
SDDRVVGTMTPSKRNFSTRGMATSEAALLTRGASQLYISLGAAEADGSITARIYYKPLVLLIWFGPILMAFGGMLSLSDR
RLRVGAPKPARAKLGVPQPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-111 45
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 3e-93 45