Gene Information

Name : OCA5_c30990 (OCA5_c30990)
Accession : YP_004634024.1
Strain : Oligotropha carboxidovorans OM5
Genome accession: NC_015684
Putative virulence/resistance : Resistance
Product : macrolide export ATP-binding protein/permease MacB
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3297331 - 3298041 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence : 
ATGGGCAGCGGCGGAATCCTCATCGAAAAAATCAGGAAGCGGTATGGCAGCGGCGATACCGCGGTCGACGCCCTGAAAGA
CATCAATATGCAGGTTGCACCCGGCGAGGTGGTCGGCCTGATCGGCCCGTCGGGCTCGGGCAAGAGTACGTTGCTCAAAG
CCCTGGGTGCGGTCATCGACCCGACTGGTGGGCGCATGACCCTCGGCGACGAGACGATCTATAATGATAGCTGGAGCATC
CCTGATCTTCGCGCGTTGCGACGCGACAAGATCGGCTTCGTCTTCCAGGCACCCTACCTCATCCCCTTTCTGGACGTCAC
CGACAATATCGCGCTGCTACCCATGCTGGCCGGCGTCCCCAACAATGAATCCCGTCGACGCGCGCGGGAACTTCTAAAGG
CGCTTGATGTCGAACATCGCGCTACTGCAATGCCCTCGCAACTTTCCGGTGGTGAACAGCAACGGGTTGCGATCGCGCGC
GGCCTGATCAACCGTCCGCCGGTCGTCCTTGCCGACGAACCCACGGCGCCGCTCGACAGCGTGCGAGCCCTCACCGTGAT
CCGCATTCTCAATGAAATGGCCGCTCAATTCGGAACAGCCATCATCGTCGTCACGCACGATGAGAAGATCATCCCGACCT
TCAAGCGCATCTACCATATCAGAGATGGCGTAACTATCGAAGAGGCTGGAGAGGGGCGCGGTTTCGAATGA

Protein sequence : 
MGSGGILIEKIRKRYGSGDTAVDALKDINMQVAPGEVVGLIGPSGSGKSTLLKALGAVIDPTGGRMTLGDETIYNDSWSI
PDLRALRRDKIGFVFQAPYLIPFLDVTDNIALLPMLAGVPNNESRRRARELLKALDVEHRATAMPSQLSGGEQQRVAIAR
GLINRPPVVLADEPTAPLDSVRALTVIRILNEMAAQFGTAIIVVTHDEKIIPTFKRIYHIRDGVTIEEAGEGRGFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCA5_c30990 YP_004634024.1 macrolide export ATP-binding protein/permease MacB CP001581.1.gene798.p Protein 2e-37 44
OCA5_c30990 YP_004634024.1 macrolide export ATP-binding protein/permease MacB NC_008702.1.4606598. Protein 3e-28 41