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Name : glcD1 (OCA5_c08330) Accession : YP_004631796.1 Strain : Oligotropha carboxidovorans OM5 Genome accession: NC_015684 Putative virulence/resistance : Unknown Product : glycolate oxidase, FAD-binding subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 882111 - 883604 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGACGATCAAGATGCCTGCGCCCGATGAGGGCATTCTCGCCCGCCGTGATGAGATCATCGCTGCCTTGCGCGAGATCGT GCCCGGCGAGGGCGTGATCGATAGTGAACGGGAAATGATGCCCTACGAGTCGGATGCACTGACCGCCTATCGTCAGCCGC CGATGGTCGTGGTGCTGCCCGATACCACTGAGCAGGTCGCGCAGGTCCTGAAGTATTGCTACGACAACGGCATCCGCGTG GTGCCGCGCGGCAACGGCACCTCGCTGTCGGGCGGCTCGTTCCCGCTTGCGGACGGCGTGCTGCTCGGGCTGTCGAAGTT CAAGCGCGTGCGCGAGATCGATTTTGACAACCGCGTCGCGGTGGTCGAGCCCGGCATGACCAACCTCGCGGTGAGTGAGG CGGTTGCGCATGAGGGCTTCTATTATGCGCCGGACCCGTCCTCGCAGATCGCCTGTTCGATCGGCGGCAACATCGCGGAG AATTCCGGCGGCGTGCACTCCCTGAAATACGGCCTCACTACCAACAACGTGCTGGGCTGCGAGTTCGTGCTGATCACCGG CGAGATTCTGCGCATCGGCGGCCGCGCACCGGAGAACGACGGCTACGACCTGATGGGCATCATCACGGGCTCGGAAGGTC TTCTCGGTGTCGTCACCGAGATCACCGTACGCATCCTCAAGAAGCCGGAAACCGCACGCGCGCTGATGGTCGGTTTCGCC GAAGTGGAAGCCGCGGGCGAATGCGTCGCGCGGATCATCGGCGCGGGCATCATTCCCGGCGGCATGGAGATGATGGACAA GGACGCGATCCATGCCGCGGAAGCGTTCGTGAAGGCGGGCTATCCGCTCGACGTCGAGGCGCTGCTCATCATCGAACTCG ACGGCCCGAGCATCGAGGTCGACGAACTGATCCGCCGTGTCGAGGCGATCGCGCTCGATTGCCGTTCCACCACCTGCCAG ATATCGAACTCCGAGCAGGAGCGGCTTCTGTTCTGGGCCGGGCGCAAGGCCGCGTTCCCCGCAGTTGGTCGGCTGTCGCC GGATTATCTCTGCATGGACGGCACCATTCCGCGCGGCAAGCTGCCGGAAGCGCTCGCCGGCATCCGCGAGCTTGGCAAGA AATACGGCCTGCGCTGCGCCAACGTGTTCCACGCGGGCGACGGCAATCTGCATCCGCTGATCCTGTACGATGCCAACGTC GCTGACGAGATGCAGCGGGCGGAGGATTTCGGTGCCGATATTCTGCGGCTGTGCGTGAAGCTCGGCGGCGTCCTCAGCGG CGAGCACGGCATTGGCGTCGAGAAGCGCGACCTGATGCCGGAAATGTTGAGCGACATCGATCTCGCTCATCACCAGCGCA TCAAGTGCGCGTTCGATGCCAAGGGGCTGCTCAACCCCGGCAAGATGTTCCCGACGCTGCATCGCTGCGCCGAACTGGGG CGGATGCATGTGCACGGCGGCAAGCTGCCATTCCCCGACATTCCGAGGTTCTGA Protein sequence : MTIKMPAPDEGILARRDEIIAALREIVPGEGVIDSEREMMPYESDALTAYRQPPMVVVLPDTTEQVAQVLKYCYDNGIRV VPRGNGTSLSGGSFPLADGVLLGLSKFKRVREIDFDNRVAVVEPGMTNLAVSEAVAHEGFYYAPDPSSQIACSIGGNIAE NSGGVHSLKYGLTTNNVLGCEFVLITGEILRIGGRAPENDGYDLMGIITGSEGLLGVVTEITVRILKKPETARALMVGFA EVEAAGECVARIIGAGIIPGGMEMMDKDAIHAAEAFVKAGYPLDVEALLIIELDGPSIEVDELIRRVEAIALDCRSTTCQ ISNSEQERLLFWAGRKAAFPAVGRLSPDYLCMDGTIPRGKLPEALAGIRELGKKYGLRCANVFHAGDGNLHPLILYDANV ADEMQRAEDFGADILRLCVKLGGVLSGEHGIGVEKRDLMPEMLSDIDLAHHQRIKCAFDAKGLLNPGKMFPTLHRCAELG RMHVHGGKLPFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-123 | 56 |
