Gene Information

Name : Runsl_1140 (Runsl_1140)
Accession : YP_004654701.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1328400 - 1329065 bp
Length : 666 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: dfe:Dfer_5610 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: exported out

DNA sequence : 
ATGATTCATTTAAAGAACATCGAAAAGGTCTATCGGACAGCCACGGTAGAGACCGTTGCGCTCAACAACATCAATTTGAG
CGTTGAAAAAGGAGAATTTGTTTCCATTATGGGCCCTTCGGGCTGCGGCAAAAGTACGCTGCTCAACATCATCGGACTGT
TGGATGAGCCTTCCAAGGGCAACGTGGAAATTGGCGGAAAACATACCAATGGCTTGCCCGACAGTCAGTTGGCGCATTTT
CGCAATCAGACATTGGGTTTTATTTTTCAGAGTTTTCACCTGATCAATGACCTGCCGGTGCTGGACAACGTTGAACTGCC
GCTTCTGTACCGTAAGGTTTCGAGCACCGAACGGCGCCGATTGGCAAGTGAAGCGTTGGAAAAAGTAGGGCTCAGCAACC
GGATGAAGCACTATCCCAATCAACTTTCGGGAGGACAAAAGCAGCGGGTCGCCATTGCGCGGGCCATTGTAGGGCAGCCG
CAGATCATTTTGGCCGATGAGCCCACGGGAAATTTGGACAGCAACATGGGCAATGAAATCATGGATATCCTGACCACGCT
CAATGAACGGGACAACGCCACCATCATCATGGTAACGCACGATGAGAACATGGCCAAACGTACGCATCGCTTAATCCGAT
TGTTTGACGGTTCTCAAGTTTCTTAA

Protein sequence : 
MIHLKNIEKVYRTATVETVALNNINLSVEKGEFVSIMGPSGCGKSTLLNIIGLLDEPSKGNVEIGGKHTNGLPDSQLAHF
RNQTLGFIFQSFHLINDLPVLDNVELPLLYRKVSSTERRRLASEALEKVGLSNRMKHYPNQLSGGQKQRVAIARAIVGQP
QIILADEPTGNLDSNMGNEIMDILTTLNERDNATIIMVTHDENMAKRTHRLIRLFDGSQVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Runsl_1140 YP_004654701.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-54 57
Runsl_1140 YP_004654701.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 2e-41 46
Runsl_1140 YP_004654701.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-41 45
Runsl_1140 YP_004654701.1 phosphonate-transporting ATPase NC_012469.1.7686946. Protein 2e-30 41