Gene Information

Name : Runsl_1629 (Runsl_1629)
Accession : YP_004655186.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1855053 - 1855739 bp
Length : 687 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_1839 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacter

DNA sequence : 
ATGAGCAATACGGTTCTTCAAGCCAGCCATATCAACAAATATTTCTATGAGCCTGAAAAGTTTCAGGTGCTGGAGAATGT
CAACTTTGAAGTGAAAAAAGGAGAGTTTTTGTCCATCATCGGTAAGTCCGGATGCGGCAAATCCACGTTGCTGTATATCC
TTTCCACCATGGATACCGACTATGAAGGCAATCTGGAAATGAACGGCCATCGCCTCACCGGGCTAAGCCAGGATCGTCTC
GCCGACTTTCGCAATGAGCATCTGGGCTTTGTGTTTCAGTTTCACTTTTTATTGCCCGAGTTTACGGTGTTGCAAAATGT
GATGCTGCCGGCGCAAAAATTAGGTAAATACAGTACGAAAGAGATCGAAGCCCGCGCCTATGATAAGCTGAAACTGGTCA
ACATGGAAGATTACGCCCGCAAACAATCCTCCAAGCTTTCGGGCGGACAGCAGCAGCGCGTAGCCATCGCCCGCGCGCTC
ATCAACGACCCCACGATTATTATGGGCGATGAACCCACGGGCAACCTCGACAAAACCAATTCAAACCTGGTCTTTGATAT
CTTTCGTAAAATCTCCCACGAAAACCACCAAACCATCATCACCGTCACGCACGACCCCGACTTCGCCAAAGGCGGAGACA
GAATCATTGAAATGTCGGATGGGAAGATCGTGAGTGGGGGGGAGTAG

Protein sequence : 
MSNTVLQASHINKYFYEPEKFQVLENVNFEVKKGEFLSIIGKSGCGKSTLLYILSTMDTDYEGNLEMNGHRLTGLSQDRL
ADFRNEHLGFVFQFHFLLPEFTVLQNVMLPAQKLGKYSTKEIEARAYDKLKLVNMEDYARKQSSKLSGGQQQRVAIARAL
INDPTIIMGDEPTGNLDKTNSNLVFDIFRKISHENHQTIITVTHDPDFAKGGDRIIEMSDGKIVSGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Runsl_1629 YP_004655186.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 4e-28 44