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Name : Runsl_2449 (Runsl_2449) Accession : YP_004655986.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : bacteriocin ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2822728 - 2824935 bp Length : 2208 bp Strand : - Note : PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC-type bacteriocin transporter; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: shg:Sph21_1896 secretion protein HlyD family protein; P DNA sequence : ATGTTTTCAGGAAAGAAAAAAACGGAAGTTAAACAACACGACATTACCGACTGCGGGGCGGCCTGTTTGGCCTCCATTGC GGCCCATTACCGCCTGCTTCTGCCCATTGCGCGCATCCGCCAATATGCCTGTACCGACAAAAAAGGCACCAACGTTTTGG GTATGATTGAGGCGGCCCAAAAACTCGGTTTTCAGGCCAAAGGCGTAAAGGGGAAGTTTGAAAGTCTGTTAAAGATCCCC ATGCCGGCCATTGCCCACGTGATCATTCAGGAAAGGCTCCATCATTATGTGGTGATCTATGAAGTGACCGATACGCACGT TGTGGTGATGGACCCAGCCTTTGGCAAAATTGAAAAGAAAACGCACGAAGCATTTCAGCAGATCTGGTCGGGCGTATTGA TTTTGCTTTTGCCGGATGAAACGTTTGAAACCGGCAACACCAAAGAATCGATAACGTTACGCTTTTGGCAATTGATTCAG CCGCATAAGTCTGTGATGCTCCAGGCACTTTTCGGGGCGTTGATCTATACGGTGTTGGGGCTTTCTTCTTCGATCTATAT GCAAAAAATTGTGGACAACGTGCTGGTGGAAGGCAATCGAAACCTGCTCAACCTGCTGAGTGTGGGCATGATCCTGATTC TGTTGTTACAGTTACTGATCGGTTCGATGAAAACCTTTTTTGCGCTGCGTACCGGTCAGCAGATTGACGCGCAGTTGATT TTAGGCTATTACAAGCACCTGATGAAGCTTCCGCAGCCATTTTTTGATACGATGAGGGTTGGAGAGATCATTTCCCGTAT CAATGATGCCGTCAAGATTCGGGCTTTTATCAACGATACCGCGCTTAACTTGGTGGTCAATGTGTTTATCATTCTTTTTT CGTTTGGAATGATGTTTACCTACGATTGGAAACTGGCCCTGATCATGATGGCTATTGTGCCTTTTTATGCGCTCAACTAT TGGGTGGTCAATCGTCTCAATAAAAAGCATCAGCGAAAATTGATGGAAAAAAGTGCGGAATTGGAATCTCAACTGGTGGA ATCGCTGAATGCCATGGGCACGATCAAACGCTTTGGGTTAGAAGGTTTTGCCAATATTAAGACCGAAACGCGCTTTGTGA AACTGTTGGAAACAATTTTTATTTCGGCCAAAAATTCCGTTTGGTCGGGTACCGCTTCGGAGTTGGTGTCGCGGCTGTTT ACGATCATTCTGCTGTGGGCGGGGTCAGGCTTCGTGTTGGACAAAGAGCTTACGCCCGGCGAATTGCTCTCTTTTTACGC GTTGATCGGCTATTTTACGGGACCTGCGAGCAGTTTGATCGGGGCTAATCGGGTGGTACAGGACGCACTCATTGCCGCCG ACCGTTTGTTTGAAATTTTGGATCTGGAACGCGAAGCGACTGACAATAAAATAGATCTAACGCCAAACATGATTCGGGAC ATTACGTTTCAGGACGTTTCGTTTCGCTACGGCACACGGGTGCAAGTGTTTGAAAATTTCAATTTAACCATTTCCAAAGG CAGCATCACGGCCATTGTGGGCGAAAGCGGTTCGGGAAAATCTACGCTGCTGTCGTTGTTGCAAAATATTTACCCCTTAC AAAACGGCAAAATTTATCTGGGCGATTACGACATCAACCACATCAGCAATCATACTCTGCGACAGTGGGTGAGTGTCGTG CCGCAGCAGATCGACCTTTTTGCGGGAAATGTCATCGAAAACATTGCCGTGGGCGAATACGAGCCCAATATGCAGCGTAT ACTCGACATTTGTCATACGCTCGGTATCAGCGAATTTATTGAGAAATTACCCAATGGTTTTCATTCCTATTTAGGGGAAA ACGGCGCTAATTTGTCGGGTGGGCAAAAACAGCGCATCGCCATTGCCAGGGCATTGTATCGTGATCCCGAAATCATCATT TTGGACGAAGCCACATCATCATTGGATTCTCTTTCTGAAAAAGCGGTTCAAGCAACGATTCAGCACTTACGGGAAGCAGG CAAGACCATTATCATCATTGCTCACCGGCTCAGCACCATTATGAATGCCGATAAAATTGTGGTAGTGCAACAGGGGAAAG TGGCAGAAGAAGGCACTCATTCACAATTGCTTCAACACCAAAGAGTGTACTACGACCTTTGGGCTTCGCAATATTTGGTG GAAGAGCGCAGGGATGTATTCAGTTATGCGGTAGAGAAGGCGGCTTAA Protein sequence : MFSGKKKTEVKQHDITDCGAACLASIAAHYRLLLPIARIRQYACTDKKGTNVLGMIEAAQKLGFQAKGVKGKFESLLKIP MPAIAHVIIQERLHHYVVIYEVTDTHVVVMDPAFGKIEKKTHEAFQQIWSGVLILLLPDETFETGNTKESITLRFWQLIQ PHKSVMLQALFGALIYTVLGLSSSIYMQKIVDNVLVEGNRNLLNLLSVGMILILLLQLLIGSMKTFFALRTGQQIDAQLI LGYYKHLMKLPQPFFDTMRVGEIISRINDAVKIRAFINDTALNLVVNVFIILFSFGMMFTYDWKLALIMMAIVPFYALNY WVVNRLNKKHQRKLMEKSAELESQLVESLNAMGTIKRFGLEGFANIKTETRFVKLLETIFISAKNSVWSGTASELVSRLF TIILLWAGSGFVLDKELTPGELLSFYALIGYFTGPASSLIGANRVVQDALIAADRLFEILDLEREATDNKIDLTPNMIRD ITFQDVSFRYGTRVQVFENFNLTISKGSITAIVGESGSGKSTLLSLLQNIYPLQNGKIYLGDYDINHISNHTLRQWVSVV PQQIDLFAGNVIENIAVGEYEPNMQRILDICHTLGISEFIEKLPNGFHSYLGENGANLSGGQKQRIAIARALYRDPEIII LDEATSSLDSLSEKAVQATIQHLREAGKTIIIIAHRLSTIMNADKIVVVQQGKVAEEGTHSQLLQHQRVYYDLWASQYLV EERRDVFSYAVEKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 7e-120 | 42 |
