Gene Information

Name : Runsl_5279 (Runsl_5279)
Accession : YP_004658710.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6137812 - 6138498 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089; KEGG: sli:Slin_4545 secretion protein HlyD; PFAM: Biotin/lipoyl attachment; SPTR: Secretion protein HlyD family protein

DNA sequence : 
ATGATTGCGGAACTAATTGGGGCAGGTAAGGAATACAAAACGGGCGACCAAACCATTGTAGCCCTGCAACCTACTACGTG
GCAGGTGAACGAAGGAGAGCTGACCCTCATCATCGGCCCGTCCGGCTCAGGCAAAACAACGCTGCTTTCGCTGTTAGGCT
GTGTGATTTATCCCAGTTATGGCGATTTGTGGGTCGATGGACGGCACATTAATGAACTGAATGAAAACCAATTGGCCCGC
TTACGCTTGGAAACCATCGGCTTCGTCTTTCAGGGCTTTAACTTACTGGCTCCGCTCAGTGCGGAAGACAATGTCGAATT
ACCCCTTAAACTCTTAGGAGTGGGAAGCAAGGAACGCCGGCAACGCGTAAAAAAAGCACTCGAAATCGTAGGCATGACCG
ACCGCCGCAAAAATCTGCCTAAAGCGCTGTCGGGAGGGCAACAACAGCGCATTGCGATTGCCCGGGCGTTGGTGACCGAA
CCCAAACTTATTTTGTGCGATGAGCCTACCGCCTCTCTCGACAAAGATTCGCTGGTGGTGGTGATGCAGGAACTTAAGAT
CTTGGCCCAAAAAGGGAAAGCGGTGGTCGTTGTAACTCACGACCCGCGCCTGCGCCAATATGCCGACCGGGCCATAGAAG
TAAAAAACGGAATGGTTACTCCCATTGAATTAAATGATGTACAATAA

Protein sequence : 
MIAELIGAGKEYKTGDQTIVALQPTTWQVNEGELTLIIGPSGSGKTTLLSLLGCVIYPSYGDLWVDGRHINELNENQLAR
LRLETIGFVFQGFNLLAPLSAEDNVELPLKLLGVGSKERRQRVKKALEIVGMTDRRKNLPKALSGGQQQRIAIARALVTE
PKLILCDEPTASLDKDSLVVVMQELKILAQKGKAVVVVTHDPRLRQYADRAIEVKNGMVTPIELNDVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Runsl_5279 YP_004658710.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-37 46
Runsl_5279 YP_004658710.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 7e-31 41