Gene Information

Name : LILAB_29125 (LILAB_29125)
Accession : YP_004668784.1
Strain : Myxococcus fulvus HW-1
Genome accession: NC_015711
Putative virulence/resistance : Resistance
Product : putative macrolide efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 7095209 - 7095955 bp
Length : 747 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGAGCACGTCCACCAACCCCCAGCCGCAGGCGGGCGCGGGCCCGGCGCGGGACATCTCCGACGTCGTCATCCGCGTGGA
GGGCCTGCGCAAGGACTACACGATGGGCTCCGAGGTGGTGCGCGCCCTGCGCGGCGTGGACCTCACCATCCGCCGCAACG
AATACGTGGCCGTCATGGGCCCGTCCGGCTCCGGCAAGTCCACCTTCATGAACCTCATCGGCTGCCTGGACGTGCCCAGC
GACGGGCAGTACTGGCTCAACGGCCAGCCGGTGGCGGGCATGACGGAGAACGCGCTGGCCCGCATCCGCAACCGCGAGCT
GGGCTTCGTGTTCCAGAGCTTCAACCTGCTGCCCCGCGCCTCCGCGCTGGACAACGTGGCCCTGCCGCTCATCTACGCGC
GCGTCCCCAAGAAGGAGCGGCGCGAGCGCGCGGCGGCCATGCTGGACAAGGTGGGCCTGGGCGCGCGCAAGGACCACCGG
CCCAACGAGCTGTCCGGTGGTCAGCGCCAGCGCGTGGCCATTGCCCGCGCGCTGGTGACGCAGCCGGCGCTGCTGCTGGC
GGACGAGCCCACGGGCGCGCTGGACAGCCGCACGGGCGAGGAGATCATGGCGCTCTTCGGTGAGCTGCACGGCCAGGGGC
AGACGCTGATGCTCGTCACCCACGAATCGGACATCGCGGCGCATGCGCGGCGGGTGCTGTTCCTGAAGGACGGCGTCATC
GAGCGGGACGAGCGGAATCGGGACTGA

Protein sequence : 
MSTSTNPQPQAGAGPARDISDVVIRVEGLRKDYTMGSEVVRALRGVDLTIRRNEYVAVMGPSGSGKSTFMNLIGCLDVPS
DGQYWLNGQPVAGMTENALARIRNRELGFVFQSFNLLPRASALDNVALPLIYARVPKKERRERAAAMLDKVGLGARKDHR
PNELSGGQRQRVAIARALVTQPALLLADEPTGALDSRTGEEIMALFGELHGQGQTLMLVTHESDIAAHARRVLFLKDGVI
ERDERNRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_29125 YP_004668784.1 putative macrolide efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-58 53
LILAB_29125 YP_004668784.1 putative macrolide efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-50 52