Gene Information

Name : ccmC (HYPMC_4588)
Accession : YP_004678361.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Virulence
Product : heme exporter protein, cytochrome c-type biogenesis protein; ABC transporter permease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 4416090 - 4416842 bp
Length : 753 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10339610, 12196152, 14532274, 1850420, 7635817; Product type t : transporter

DNA sequence : 
ATGCAGACGCTTACGCAACGCCTCGCCAATCCGACACGGTTCATGGAGCTTTCCGCTCGCGTGCTGCCGTGGGTGACGGC
CGCTTCGGCTATCCTGTTGGTTTACGGTCTTTATTTGGCATTTCTGGATTCGCCGCCTGACTATCAGCAGGGCGAGACGG
TCCGGATCATGTACATCCATGTGCCGTGCGCGTGGCTCTCGATGATGATTTACGGGCTGATCGCTCTGTCGAGTTTCGGG
CTGCTCGTGTTTCGTCATCCGCTGGCGGACGTTTCGGCGAAGGCTGCGGCGCCGCTCGGCGCGGCGTTCACGTTCCTGGC
GCTGGTGACCGGTTCGCTCTGGGGCAAGCCGATGTGGGGCACCTACTGGGTTTGGGATGCGCGACTGACGTCGGTGCTGC
TGCTGTTCTTTCTCTATCTCGGCTTGATTGCGCTGCGCTCGGCGCTCGAAGACGAAGGGGCTGCAGCCAAGCTGACAGCC
GTCCTGGCGCTCGTTGGCGTGACGCTGCTGCCGATCATCAAGTTTTCGGTCAACTGGTGGAATACGCTGCATCAGCCGTC
GACGGACTTTACATCGACTGTCGATCCCAGCATGCGTCTGCCGTTGCTGGTGATGGCGCTAGCGTTCACGCTGATGTTCT
TCGCGATGCATCTGAAAGCGATGAGGAACGAGATTCTTCGCCGCCGGGTGAAGGCGCTCAGGACACAGGCGGTCATGGGC
CGGGATCGGCTCGCGCCTCAGGCAGCGGAGTGA

Protein sequence : 
MQTLTQRLANPTRFMELSARVLPWVTAASAILLVYGLYLAFLDSPPDYQQGETVRIMYIHVPCAWLSMMIYGLIALSSFG
LLVFRHPLADVSAKAAAPLGAAFTFLALVTGSLWGKPMWGTYWVWDARLTSVLLLFFLYLGLIALRSALEDEGAAAKLTA
VLALVGVTLLPIIKFSVNWWNTLHQPSTDFTSTVDPSMRLPLLVMALAFTLMFFAMHLKAMRNEILRRRVKALRTQAVMG
RDRLAPQAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-28 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_004678361.1 heme exporter protein, cytochrome c-type biogenesis protein; ABC transporter permease VFG1856 Protein 2e-27 43