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Name : secD (CNE_1c30720) Accession : YP_004686865.1 Strain : Genome accession: NC_015726 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3196825 - 3198795 bp Length : 1971 bp Strand : + Note : - DNA sequence : GTGGCTGCCAGGCGGCTGTTTGCCAAACCGGTTCGGCCCCGCCGACGTGGTGCGCCACGCCAGCGCCGGCCCCGCCAACC GCAGAATGACTGGCCCGAGATGAATCGTTATCCGCTTTGGAAATACCTCGTGATCCTGGTGGCCCTGGCCATCGGCATCA TCTATACCTTGCCGAACTTCTTCGGCGAGGCGCCTGCCGTGCAGGTGTCCTCGGGCAAGGCCACGGTCAAGGTCGACCTG GCGATGCAGAAGCAGGTCGAAGAGATCCTGGCGCAGAACCAGCTGCGGCCTGATGGCGTCTTCTTTGATATTTCCGGCCA GTCCGGCTCGGTCAAGGCGCGCTTCCGCACCACCGACGAGCAGCTCAAGGCCAAGGACGTGCTGTCGCGCACCCTGAACC CGGACGCGGCCAACCCCACCTACGTGGTGGCGCTGAACCTGCTGTCGGGCTCGCCGCGCTGGCTGACCGCCATGCATGCG CTGCCGATGTACCTGGGCCTGGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTCGACATGAAGGGCGCCGTCGACAA GAAGCTCGACAGCCTGGGCGGCGACGCGCGCACCCTGCTGCGCGACAAGAGCATCCGCCACGGCGGCATCGACCGCGACG GCGAGCGCCTGACGGTGCGCTTCAACAACGCAGACGACGCCAACCGCGCGCGTCCCATCCTGGCCGACAACCTGCGCGAA GTGGCCTTCGCCATGGACGGCAACAATATCGTCGGCACCTTCACCGAAGCCGCGCGCAAGGCGGTGCAGGACGCAGCGGT CAAGCAGAACATCACCACGCTGCACAACCGCGTGAACGAGCTTGGCGTGGCCGAGCCGGTGATCCAGCAGCAAGGCGCCG ACCGCATCGTGGTGCAGCTGCCGGGCGTGCAGGACACCGCCAAGGCCAAGGACATCATCGGCCGCACCGCCACGCTCGAA GCCCGCCTGGTCGACAACGACGCGCCGCGCAGCCCGCGCCCGGGCGACCCGATCCCGTTCGGCAGCGAGCTCTTCACGCA AGGCAACGGCGCCCCGGTGGTGCTCAAGAAGCAGGTCATCTTCACCGGCGACCGCATTGAAAGCGCCTCGGCCGGCTTCG ACCAGAACCAGCATCCTTCGGTCAACATCAAGCTCGACGCCCAGGGCGGCCGCGTGCTGCGCGACGTCTCGCGCGAGAAC CTGAAGAAGCCGATGGCGATCGTGCTGTTCGAAAAGGGCAAGGGCGAAGTGCTGACGGTGGCGACGATCCAGTCCGAACT GGGTTCCAGCTTCCAGATCACCGGCTCCTACTCCACCGAAGCCGCCAACGACCTGGCGCTGCTGCTGCGCGCCGGCTCGC TGGCCGCACCGATGGAGATCATCGAAGAGCGCACCATCGGCCCGTCGCTGGGCGCGGACAACATCCAGAAGGGTTTTGAC TCGGTCGCCTACGGCTTTGCCGCCATCGCCGTGTTCATGGTCCTGTACTACATGCTGTTCGGCGTGTTCTCGGTGGTGGC GCTGGGCGTGAACCTGCTGCTGCTGATCGCGGTGCTGTCGATGCTGCAGGCCACGCTGACGCTGCCGGGCATTGCCGCCA TCGCGCTGGTGCTGGGCATGGCCATCGACGCCAACGTGCTGATCAACGAGCGCATCCGCGAAGAACTACGCGCGGGCGCG TCGCCGCAGATGGCGATCGCGGTCGGCTTCGACCGCGCCTGGGCCACCATCCTGGACTCCAACGTGACCACGCTGATCGC CGGCCTGGCACTGCTGGCCTTTGGTTCGGGCCCGGTGCGCGGCTTTGCCGTGGTGCACTGCCTGGGCATCCTGACCTCGA TGTTCTCGGCGGTGTTCTTCAACCGCGGCCTGGTCAACCTCTGGTACGGCCGCAAGAAGAAGCTGCAGAGCGTGGCCATC GGCCAGATCTGGAAGCCGGGCAACACCACCGACACGCCGGTCGCCAAGTAA Protein sequence : MAARRLFAKPVRPRRRGAPRQRRPRQPQNDWPEMNRYPLWKYLVILVALAIGIIYTLPNFFGEAPAVQVSSGKATVKVDL AMQKQVEEILAQNQLRPDGVFFDISGQSGSVKARFRTTDEQLKAKDVLSRTLNPDAANPTYVVALNLLSGSPRWLTAMHA LPMYLGLDLRGGVHFLLQVDMKGAVDKKLDSLGGDARTLLRDKSIRHGGIDRDGERLTVRFNNADDANRARPILADNLRE VAFAMDGNNIVGTFTEAARKAVQDAAVKQNITTLHNRVNELGVAEPVIQQQGADRIVVQLPGVQDTAKAKDIIGRTATLE ARLVDNDAPRSPRPGDPIPFGSELFTQGNGAPVVLKKQVIFTGDRIESASAGFDQNQHPSVNIKLDAQGGRVLRDVSREN LKKPMAIVLFEKGKGEVLTVATIQSELGSSFQITGSYSTEAANDLALLLRAGSLAAPMEIIEERTIGPSLGADNIQKGFD SVAYGFAAIAVFMVLYYMLFGVFSVVALGVNLLLLIAVLSMLQATLTLPGIAAIALVLGMAIDANVLINERIREELRAGA SPQMAIAVGFDRAWATILDSNVTTLIAGLALLAFGSGPVRGFAVVHCLGILTSMFSAVFFNRGLVNLWYGRKKKLQSVAI GQIWKPGNTTDTPVAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-95 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
