Gene Information

Name : lolD (RLO149_c011940)
Accession : YP_004690161.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1230411 - 1231094 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGACCCGATCCTTGAGATGCGCGGCATCACGAAGTCGTATAATGCGGGGCAGGCAAACAGCGTCACTGTCCTGCG
CGGGATCGACCTGAGCATCGCCGCAGGAGAGGTGGTCGCCTTGGTGGCGCCCTCGGGGGCGGGTAAATCCACTTTGCTGC
ACATTGCTGGCCTGCTGGACGTGGCGGATGCGGGCCAGGTTCTGATTGATGGCGAAGAGATGAGCGGCCTAAGCGATGCG
CGGCGCACGGCGATACGCCGCAATGATGTTGGATTTATCTACCAGTTTCACCACCTGTTGCCTGAATTCAATGCGGCTGA
AAACATTATCCTGCCGCAACTCGCCAATGGCATCTCCAAAACCACGGCTGCCGCGCGCGCGGCCGCTTTGCTGTCTGCGG
TGGGTATCGCGCCGCGGGCAGCACACCGCCCCGGCGCCCTGTCGGGGGGAGAGCAGCAACGCGTCGCCTTTTGTCGTGCA
CTGGCGAATGCGCCCAAATTACTACTCGCGGATGAGCCGACGGGCAATCTGGATCCGGGCACCTCGGATCAGGTGTTTGG
TGCCCTGATGCAGCTTGTGCGGGACACAGGTTTGTCAGCGTTGATTGCCACGCATAACCTTGCATTGGCCGCACGTATGG
ATCGCCAAATCCGGTTGGATGCAGGGCAGCTTTCTGAGGCGTGA

Protein sequence : 
MSDPILEMRGITKSYNAGQANSVTVLRGIDLSIAAGEVVALVAPSGAGKSTLLHIAGLLDVADAGQVLIDGEEMSGLSDA
RRTAIRRNDVGFIYQFHHLLPEFNAAENIILPQLANGISKTTAAARAAALLSAVGIAPRAAHRPGALSGGEQQRVAFCRA
LANAPKLLLADEPTGNLDPGTSDQVFGALMQLVRDTGLSALIATHNLALAARMDRQIRLDAGQLSEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_004690161.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7685735. Protein 2e-34 42
lolD YP_004690161.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-32 42
lolD YP_004690161.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 2e-33 41