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Name : ccmF (RLO149_c024430) Accession : YP_004691374.1 Strain : Roseobacter litoralis Och 149 Genome accession: NC_015730 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2502577 - 2504547 bp Length : 1971 bp Strand : - Note : - DNA sequence : ATGATTACAGAACTCGGACACTTCGCCCTCATCCTCGCCTTCATGGTTGCCATCGTACAAACGGTCATTCCTTTGATTGG TGCCCATAAACGATGGCCATCCTGGATGGCCGTTGCGGAACCTGCGGCAAACGCTCAGTTTTTGCTGACGGCGTTTTCAT TTGGTGCTCTGATGTGGGCATTTATTGTGTCGGACTTCAGTCTGCATTTGGTGACGCTGAACAGCCACTCGGCCAAACCA ATGCTGTACAAAATAAGCGGTACATGGGGCAACCACGAAGGGTCCATGTTGCTCTGGGTGCTGATTGTTGCGCTGTTTGG CGCGATGGCGGCTTGGTTTGGTGGCAACCTGCCGCCGACGCTGAAAGCCCGCGTGCTGAGTGTGCAGGCCGCGATTGGTG TCGCTTTCTTTGCGTTCATCATCTTTACGTCGAACCCGTTCACGCGCCTTGCCGTGCCGCCCTTTGACGGCCAGGATCTC AATCCGCTCCTTCAGGACCCGGGATTGGCCTTCCATCCACCGTTTCTCTATCTGGGCTACGTTGGCCTTAGCATGGCGTT CAGCTTCGCGGTCGCCGCCCTGATTGAAGGGCGTGTCGATGCAGCTTGGGGCCGTTGGGTGCGTCCCTGGACGCTGGCGG CCTGGGTGTTCCTGACAATTGGTATCGCACTTGGTTCTTGGTGGGCCTATTACGAATTGGGTTGGGGCGGTTTCTGGTTC TGGGACCCGGTTGAAAATGCATCCTTCATGCCGTGGTTGCTGGCTGCTGCCTTGCTGCACTCCGCCATCGTGGTGGAAAA GCGCGAAAGCCTCAAAAGTTGGACCATACTGCTGGCCATTCTCGCCTTTGGTTTTTCACTGATTGGTACATTCATTGTCC GCTCGGGTCTTTTGACCTCGGTGCATGCCTTCGCGAATGACCCGGAACGTGGTGTGTTCATCCTGATGATCATGGGCTTT TTTATGGGCGGCGCGTTGATCCTCTTTGCTTTCCGGGCAGGCGCGATGGAGGCGCGGGGCGTTTTTGGTGTCGTCAGCCG TGAAAGCGCGCTCGTTGCGAACAACCTGTTGCTGGCTGTGTCGTGCTTTGTTGTCTTTGTCGGCACCATGTGGCCGCTCG TGGCCGAGATGTTTTTTGACCGCAAGCTCAGCGTGGGGCCGCCGTTCTTCAACATGGCCTTTTCGCCCTTCATGCTTGTC CTTGGCATTCTGCTGCCCATCGGGTCAGCCATGCCTTGGAAGCGGGCGCATATCGCGCGCGCCCTGAAACCGCTGCGCTA TGTGTTTGTCCTTGCGTTGGCGATTGGTGGTCTTGCCTATGCGATGCAATCTGGTCGCAGCCTTCTTGGGCCGATTGGTC TCTTCCTCGCGGCTTGGATCGTGATGGGCACGATCATCGATTTCATCCAACGTGCGGGCCGGGGTCCGGAGCGGTGGGCG CGAATCTGGCGACTGCCGCGGGCAGACTGGGGCAAGATGGTTGCTCATGCCGGTGTCGGTATCACGATGATGGGCGTCTG TGGGATCATGGCCTGGCAATACGAAGACATCCGGGTTGCGCAGTTTGGCGAACCCTATGAGGTCGGCCGCTATACCATCA CGCTGGATAAGGTCAGCAATTACGAGGGGCCGAATTTCCTGTCTACCACCGGCTATATCACGCTGGCGCAGGATGGTCGC GAAATTGCACAACTGAAACCGGAAAAGCGCATTTATCCGGTGGCACAGATGCCGACGACCGAGGCTGCGATTGATTATGA CCTTATCCGTGATGTTTACGTGGTCATCGGTGATGAGCAGGCGAATGGGGGCTGGGCGGTACGGACCTATGTCAAACCGC TCACCAACTGGATATGGATTGGCAGTGGCCTGATGGCACTTGGCGGGCTTCTCAGCCTGTCTGACCGTCGGTTCCGCGTC GCCGCAGGCGCGCGCAACAAGTCGTCCGCGCTACCGGTAGCCGCAGAATGA Protein sequence : MITELGHFALILAFMVAIVQTVIPLIGAHKRWPSWMAVAEPAANAQFLLTAFSFGALMWAFIVSDFSLHLVTLNSHSAKP MLYKISGTWGNHEGSMLLWVLIVALFGAMAAWFGGNLPPTLKARVLSVQAAIGVAFFAFIIFTSNPFTRLAVPPFDGQDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWVFLTIGIALGSWWAYYELGWGGFWF WDPVENASFMPWLLAAALLHSAIVVEKRESLKSWTILLAILAFGFSLIGTFIVRSGLLTSVHAFANDPERGVFILMIMGF FMGGALILFAFRAGAMEARGVFGVVSRESALVANNLLLAVSCFVVFVGTMWPLVAEMFFDRKLSVGPPFFNMAFSPFMLV LGILLPIGSAMPWKRAHIARALKPLRYVFVLALAIGGLAYAMQSGRSLLGPIGLFLAAWIVMGTIIDFIQRAGRGPERWA RIWRLPRADWGKMVAHAGVGITMMGVCGIMAWQYEDIRVAQFGEPYEVGRYTITLDKVSNYEGPNFLSTTGYITLAQDGR EIAQLKPEKRIYPVAQMPTTEAAIDYDLIRDVYVVIGDEQANGGWAVRTYVKPLTNWIWIGSGLMALGGLLSLSDRRFRV AAGARNKSSALPVAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-121 | 48 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 8e-99 | 46 |
