Gene Information

Name : RLO149_c026010 (RLO149_c026010)
Accession : YP_004691527.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2671312 - 2672004 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGGTTTTGACGGTCAGCCACCTTGCCAAAGAATATGAGACTGGCGGCATTTCAGTGCCGGTTCTGCGGGATGTGAGTTT
TGAGGTGCCGCGCGCGGGCACGTTGGCGCTCGAAGGGGAATCCGGCAGTGGGAAAAGCACGGTGTTGCACCTGATCGCCG
GGCTGGATGTGCCAACGGGCGGTAGCATTGTGCTGGACGGGCTAGAGGTCGCTGGTCTGTCGGATGCAAAATCTGCACAG
CTGCGCCGCACAACGGTCGGGATTATCTTTCAGCAGTTCAACCTGATCCCCAGCCTGAGCGTCGCGGCGAATATCGCGTT
TCATGCCCGACTTGGCGAACGCTTCGACCCGGAATGGGCGCGTCACGTCGCTGAACAGATCGGGCTGGCAGACCATATGA
CCAAATACCCCGAGGCGCTTTCCGGCGGGCAGCAACAGCGTGTGGCCATTGCCCGCACCCTTGCCGCGCGCCCCGGCCTG
ATCCTCGCGGATGAGCCAACGGGTAATCTGGATGAGGACACGGCGGATACGGTTTTGAACCTGATGCTGGAAAGCGCGGC
AGAGGCGGGTGCGGCCGTGTTGATGGTCACGCATTCCCCCCGTCAGGCGGCCCGGATGGGGCGGCGTATTCGTCTGTCGC
ATGGGGTTGTGCAGGATGCGAACGCGCCCATGCGACCCGTGGCGGTGCCATGA

Protein sequence : 
MVLTVSHLAKEYETGGISVPVLRDVSFEVPRAGTLALEGESGSGKSTVLHLIAGLDVPTGGSIVLDGLEVAGLSDAKSAQ
LRRTTVGIIFQQFNLIPSLSVAANIAFHARLGERFDPEWARHVAEQIGLADHMTKYPEALSGGQQQRVAIARTLAARPGL
ILADEPTGNLDEDTADTVLNLMLESAAEAGAAVLMVTHSPRQAARMGRRIRLSHGVVQDANAPMRPVAVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RLO149_c026010 YP_004691527.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-40 43