Gene Information

Name : rnhA (RLO149_c034340)
Accession : YP_004692338.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 3493259 - 3493711 bp
Length : 453 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGAGTTATTCGCCTATACTGACGGTGCCTGTTCGGGCAACCCGGGTCCCGGCGGCTGGGGCGTTTTGCTGCAGGC
CAAAGAGGGCGACAGGCTGGTCAAAGAGCGTGCGCTCAAGGGCGGTGAAGCACATACCACCAACAACCGGATGGAGCTTT
TGGCCGCCATCAACGCGCTGGAATCCCTCAGCCGCGCCAGCACGATTACCATCGTGACCGACAGCAACTACGTCAAAAAT
GGCATCACCGGCTGGATTCACGGCTGGAAGCGAAACGGCTGGAAAAATGCCGCCAAAAAACCCGTCGCGAATGCAGAACT
CTGGCAGAGGCTGGATGAGGCCAATGCACGTCACGACGTCACCTGGAAATGGGTCAAAGGGCACGCCGGGCACGCGGAAA
ACGAACGCGCAGACGAATTGGCGCGCGCGGGCATGGCGCCGTTCAAACCATGA

Protein sequence :
MPELFAYTDGACSGNPGPGGWGVLLQAKEGDRLVKERALKGGEAHTTNNRMELLAAINALESLSRASTITIVTDSNYVKN
GITGWIHGWKRNGWKNAAKKPVANAELWQRLDEANARHDVTWKWVKGHAGHAENERADELARAGMAPFKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-37 59