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Name : glcD (RLO149_c000870) Accession : YP_004689082.1 Strain : Roseobacter litoralis Och 149 Genome accession: NC_015730 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 90888 - 92336 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGGAAATGCCGGTACCTGATGCCGCGATCATGGCACGTAAGGCGCATCTGGTAGAGCGTTTGCAAGCCGTGCTGCCTGC CGATGCGGTTATTCATAACCCGCATCAGACGCGCGCCTACGAGTGTGATGCGTTGACGGCCTATAAATGTCCGCCGATGG CTGTCGTGCTGCCAACATCCACCAAAGAGGTGTCTGATGTGCTGCGCATTTGCCACGAGGATGGCGTGCCTGTCGTGCCA CGTGGGTCTGGCACCTCTTTGGCGGGGGGCGCTTTGCCAACGGCAGACTGCGTGATTCTGGGCGTGGCGCGCATGAATGA CGTGCTCGAAACGAACTACGATGATCGTTACATCCGCGTGGAAACCGGCCGTACCAACCTGAGCGTGACCGGCGCCGTGG AAGAAAACGGCTTTTTCTATGCGCCCGACCCGTCCAGCCAGCTGGCCTGCGCAATCGCGGGCAATATCGCGATGAATTCA GGGGGCGCGCATTGCCTGAAATACGGCGTGACCACCAATAACCTGATGGGCGTCACCATGGTGATGATGAATGGGGAAAT CATTGAGGTGGGCGGGGCGCATATGGACCCGGCAGGACTGGATCTTCTCGGTCTGATCTGCGGCTCTGAAGGGCAATTGG GCGTTGTGACCGAAGCCACCTTGCGGATTTTGCCCAAACCGGAAGGCGCGCGCCCCGTGCTCATGGGATTCGATGACAGT GAAGTTGCGGGCGCTTGCGTCAGTGACATCATCAAGGCGGGCGTTCTGCCGGTCGCGATTGAGTTCATGGATCGTCTGTG CATTGAGACCAGCGAAAACTTCGCGCAGGCAGGTTATCCGATGTGCGAAGCCTTGCTGATCGTTGAGGTCGAAGGTTCAG AGGCTGAGATTGATCATCAACTGGACCTGATCATGGAAATCGCGCGCCGCCACGACCCTGTTGAATTGCGTCAAAGCACC TCCGCGGAGGAAAGCGCGTTGATCTGGCTGGGGCGCAAATCTGCCTTTGGTGCGATCGGTCAAATCAATGATTACATGTG TCTGGACGGGACGATCCCGGTGTCGTCGCTGCCCCATGTGCTGCGTCGGATCGGAGAGTTGTCAGAACAGTTCGGCCTGC AGGTTGGCAACGTATTCCATGCAGGTGACGGGAACATGCACCCGCTGATCCTTTTTGATGCGAACAAGCCCGGCGATCTG GAGCTCTGCGAAGAGATGGGGGCAGAAATTCTTAAGCTCTGTGTCGAAGTGGGCGGCTGTCTGACCGGCGAACATGGCGT GGGCATTGAAAAACGCGACCTGATGTCGTTCCAGTATGAGCCGGAGGATCTTGAAGCGCAGATGATCGTCAAGGATGTGT TTGACCCGAAATGGTTGTTGAATCCGGCCAAGGTCTTTCCTTTGGCCGTCTCTGAAAGTCGACGTGCGCTGCCTTTGGCC GCCGAATAG Protein sequence : MEMPVPDAAIMARKAHLVERLQAVLPADAVIHNPHQTRAYECDALTAYKCPPMAVVLPTSTKEVSDVLRICHEDGVPVVP RGSGTSLAGGALPTADCVILGVARMNDVLETNYDDRYIRVETGRTNLSVTGAVEENGFFYAPDPSSQLACAIAGNIAMNS GGAHCLKYGVTTNNLMGVTMVMMNGEIIEVGGAHMDPAGLDLLGLICGSEGQLGVVTEATLRILPKPEGARPVLMGFDDS EVAGACVSDIIKAGVLPVAIEFMDRLCIETSENFAQAGYPMCEALLIVEVEGSEAEIDHQLDLIMEIARRHDPVELRQST SAEESALIWLGRKSAFGAIGQINDYMCLDGTIPVSSLPHVLRRIGELSEQFGLQVGNVFHAGDGNMHPLILFDANKPGDL ELCEEMGAEILKLCVEVGGCLTGEHGVGIEKRDLMSFQYEPEDLEAQMIVKDVFDPKWLLNPAKVFPLAVSESRRALPLA AE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-102 | 46 |
