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Name : Nit79A3_1272 (Nit79A3_1272) Accession : YP_004694512.1 Strain : Nitrosomonas sp. Is79A3 Genome accession: NC_015731 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1391168 - 1393222 bp Length : 2055 bp Strand : + Note : KEGG: nit:NAL212_1562 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein DNA sequence : ATGATTCCAGAAATTGGTAACTTTTCCCTAATACTTGCACTACTTTTAGCCTTAATCCAAGGAACACTACCTATTATTGG TGCAGCACGCGGTATCCCGTCATGGATAGCACTCGCCAGGCCGGTAGTGCAGGGACAATTTGTGTTTGTTTTAATAGCAT TTCTATGTTTGGGGTATTCGTTTGTCAGTAGTGATTTCTCAGTAATGAATGTGGCAAAGAACTCAAATTCGGAATTGCCA TTTCATTTCCGGCTGGCTGCTACATGGGGTTCCCATGAAGGATCTTTATTGCTATGGGTATTAATGCTCGCAGGTTGGTC GGTTGCGGTCAGTGTCTTTAGCAAACAGCTGCCGGATGATATCGTAGCGCGAGTTATTGGTGTATTGGGATTAGTAAGTG TAGGTTTCTTGTTATTCATGTTGTTTACTTCAAACCCATTTGATCGCCTATTACCAGCAGCATTAGAGGGCAGTGATTTA AATCCGTTGTTGCAAGATGCTGGTATGGTGATACATCCACCTATGCTCTATATGGGGTATGTGGGGTTTTCAGTTGCTTT TGCTTTCGCCATTGCAGCCTTGTTAAGTGGAAGATTGGATGCGACTTGGGCCCGGTGGTCGCGTCCTTGGACGATAGTTG CGTGGGTATTTTTGACGATAGGAATTATGCTGGGTAGTTGGTGGGCATATTATGAGCTGGGCTGGGGTGGCTGGTGGTTT TGGGATCCTGTAGAGAATGCATCATTTATGCCTTGGCTGGTGGGTACGGCACTGGTTCATTCTTTAGCAGTCACTGAGAA GCGTGGCAGCTTCAAAAGCTGGACAGTTTTACTAGCAATCTCCACATTTGCCTTAAGCTTGCTGGGAACATTCCTGGTGC GATCGGGCGTGCTAACTTCCGTGCATGCTTTTGCGACGGATCCTGCGCGTGGCGTATTTATCCTTGCATTCTTGGTCATC GTCATCAGTTCCTCGTTATTATTGTTTGCATGGCGCGCACCTAAAGTTGGTTTGGGTGGCAAGTTTGATATGTTGTCACG TGAATCATTGTTACTGGCTAATAATCTATTATTATTGGTAGCAGCAAGCAGTGTTTTACTCGGAACTCTGTACCCTTTGA TTATCGATGCACTCGGTCTTGGCAAACTATCGGTTGGCCCGCCTTTTTTTGAAGCTGTGTTCGTACCGGTTATGACACCC GCTATTTTTCTGATTGGTGTTGGTCCTATTTCGCGTTGGAAACAAATGAGTTTGCCGACTTTAGCAATCCGTTTGCGTTG GGCTTTTGCTGTCAGCGTGGTTTCTGCCTTGATTGCACCGTATTTTATGGGTGAATGGAAACCAATGGTGAGCTTTGGCT TATTGTTAGCTTTCTGGATCATAGTTTGTGCTTTTGTTAATATAAAACATCGAATTAATAATAGTGGGCAAGGTAGTTTA TTTTCACGGCTAATTAAACAATCCAGAAGTTATTATGGAATGCACTGCGCACATTTAGGTGTGGCCGTATTTATTATCGG TGTAACCCTGGTAAATAGTTACGAAACTGAAAAAGATGTGCGGATGGATATAGGTAGTAAAGTGACGGTTGGAGGGTATA CATTCCAATTTAACGGCGTGAGCGATGTCGTTGGTCCTAACTACAAAGCAGTACGTGGCGACATTGCTGTCATTCAAGAT GAAAAGGTTATTCGGGAAATGCATCCTGAGAAGCGGACTTACAATGCGTCAGGTATGGCAATGACTGAAGCGGCCATAGA TACTGGCTTATTCCGTGATCTTTATGTTGCACTGGGTGAGCCTTTGGCCAATAATGCCTGGGTAGTGCGTGCTTATCACA AACCGTTTGTAGACTGGATCTGGTTTGGATGTTTGCTGATGGCAATCGGCGGCATCTTATCTGTAACTGATCGCCGCTAT CGCTTAAAGATAACCAAAACGAGCCCTGTTATTGCAAAGAATACAGAAGTAGAGCGTTTACAAGAAGAAATTCCTATAAC AACTGCTTCGACAGCGAGTAATACTGTATTGGCAGCGGAGACAAGAAAAGCATGA Protein sequence : MIPEIGNFSLILALLLALIQGTLPIIGAARGIPSWIALARPVVQGQFVFVLIAFLCLGYSFVSSDFSVMNVAKNSNSELP FHFRLAATWGSHEGSLLLWVLMLAGWSVAVSVFSKQLPDDIVARVIGVLGLVSVGFLLFMLFTSNPFDRLLPAALEGSDL NPLLQDAGMVIHPPMLYMGYVGFSVAFAFAIAALLSGRLDATWARWSRPWTIVAWVFLTIGIMLGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLAVTEKRGSFKSWTVLLAISTFALSLLGTFLVRSGVLTSVHAFATDPARGVFILAFLVI VISSSLLLFAWRAPKVGLGGKFDMLSRESLLLANNLLLLVAASSVLLGTLYPLIIDALGLGKLSVGPPFFEAVFVPVMTP AIFLIGVGPISRWKQMSLPTLAIRLRWAFAVSVVSALIAPYFMGEWKPMVSFGLLLAFWIIVCAFVNIKHRINNSGQGSL FSRLIKQSRSYYGMHCAHLGVAVFIIGVTLVNSYETEKDVRMDIGSKVTVGGYTFQFNGVSDVVGPNYKAVRGDIAVIQD EKVIREMHPEKRTYNASGMAMTEAAIDTGLFRDLYVALGEPLANNAWVVRAYHKPFVDWIWFGCLLMAIGGILSVTDRRY RLKITKTSPVIAKNTEVERLQEEIPITTASTASNTVLAAETRKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-171 | 63 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-122 | 58 |
