Gene Information

Name : Nit79A3_3275 (Nit79A3_3275)
Accession : YP_004696408.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3480842 - 3481531 bp
Length : 690 bp
Strand : -
Note : TIGRFAM: Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like; KEGG: nit:NAL212_2970 lipoprotein releasing system, ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAATGATACCGTCATCTCTTGCCGCAATCTGGTCAAGCAGTTTTCCCAGGGTGATTTGGCAGTTCCCGTATTAAAGGG
CGTTAATCTGGATCTGATTAAAGGGGAAATGTTAGCGATTGTCGGCGCGTCCGGTTCCGGCAAAAGCACGTTGCTGCATA
TACTCGGCGGATTGGATGCGCCGACAAGCGGGAATATCCGGATTCTCGGACAAGATATCGCACAAATTAATGAAGAAGAG
CGTTGCCGGTTACGCAATGGTTCACTCGGCTTCATTTATCAGTTTCATCATTTGTTACCGGAATTCAGCGCGCTGGAAAA
TGTGGCCATGCCGCTGCTAATTCGTAGATTGCCGAACCAGGAAGCGTATGACCGGGCAGAAGATATTTTGAAACAAGTTG
GATTGAGTCATCGCCTGACACATACTCCCGGTGAATTATCCGGCGGTGAACGCCAGCGCGCTGCGGTTGCGCGTGCATTG
GTTACACAACCCGCCTGCATCCTGGCTGATGAACCTACTGGAAATCTTGACCGGCAGACAGCTGAAAGCGTCTTTGATTT
GATGCTGGAGTTGAACCATAGAATTAATGCCAGTCTGGTCATTGTGACGCACGATTCCCGTCTTGCCAATCGTGCCCAAC
AAATCAAGCAATTGATCGATGGCGTTTTATGCGATATTCCAAATGCATAA

Protein sequence : 
MNDTVISCRNLVKQFSQGDLAVPVLKGVNLDLIKGEMLAIVGASGSGKSTLLHILGGLDAPTSGNIRILGQDIAQINEEE
RCRLRNGSLGFIYQFHHLLPEFSALENVAMPLLIRRLPNQEAYDRAEDILKQVGLSHRLTHTPGELSGGERQRAAVARAL
VTQPACILADEPTGNLDRQTAESVFDLMLELNHRINASLVIVTHDSRLANRAQQIKQLIDGVLCDIPNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_3275 YP_004696408.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 6e-36 46
Nit79A3_3275 YP_004696408.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 4e-37 42