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Name : Nit79A3_0478 (Nit79A3_0478) Accession : YP_004693759.1 Strain : Nitrosomonas sp. Is79A3 Genome accession: NC_015731 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 512090 - 514171 bp Length : 2082 bp Strand : - Note : KEGG: nit:NAL212_1060 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGAACCGCTACGCACTTTGGAAATATCTGATTATTGCGGTTTCGCTTTTACTCGGACTGCTTTACACATTACCTAATTT TTATGGTGAATCTCCTGCAGTACAGATCTCACCGTTACGGGTTTCTGCAAACGTTGACACCACTTTGTTGCAACGAGTCG AAGACGCATTAAAAAAAGCCAATCTTGAAACCGTTGGAATTTTGCTTGAAGCAGACAGTATCAAGGTACGTTTCGCTGAT ACTGACGTACAAATCAAGGCGAAAGACCTTTTGGAATCGTCTCTCGGCAAAGAATACATCATTGCACTGAATCTGCTACC CAATTCCCCCGCATGGTTAACCAATCTTGGCGCGCTGCCAATGTATCTGGGACTTGACTTGCGTGGCGGTGTGCATTTTA TGCTTGCAGTTGATATGGAGGGCGCTCTCGATAAATCACTGGATCGCTACAGTGCCGATATTCGCAGCACATTGCGTGAG CATAAAATCCCATATACCGGGCTTGAGAAACAAGATAAGAAACTGATCTTGAAGTTCCGTGATACCGAAGCACGCGCAAA GGCAGAAACCGAATTAAAATCGAATTACCCTGATCTCGGTTTAATTGAAAAGGAAGCCGATAACAGGTATCACCTCATTG CTGCGATCAAACTAGAAGCCCAAGTGCGCATGCAAGATGCAGCCGTAATGCAGAATATCACTACACTGCGTAATCGAGTT AATGAGCTGGGCGTTGCTGAACCGATTATTCAAAAAGCGGGAGCGGATCGCGTCATTGTTCAATTGCCGGGTGTTCAGGA TACGGCCAAGGCAAAAGATATTCTGGGACGGACAGCTACACTGGAAATTCGTATGGTCGATGACGAACATGATCTTGACG CTGCCATACGCGGAAAAATTCCTTTTGGTACCGAACTTTATGAGGAACGTGGCGGCGGTCCGATACTCGTCAAGAAATAT GTTTTACTTACAGGTGAGCGTATCACCGATGCACAGCCCGGCTTTGATAAAGATAATCAACCGGCAGTGCATATCAATCT GGATAACAGTGGCTCGCGTATTTTCAAGCAATTAACACGTGAAAACGTTGGCAAAAGAATGGCAATTCTTTTAATTGAGA AAAACCAAACAGAAGTTGTCACGGCACCGGTTATTCGTGAAGAAATTGGTGGCGGGCGTGTCCAGATCAGCGGACGCATG ACCAGTAGAGAAGCTCGCGATGTTGCATTGTTACTGCGAGCAGGTGCGCTGGCAGCGCCGATGGATATTATCGAAGAACG TACAGTAGGCCCAAGTCTGGGTGCCGAAAATATCGCCCGAGGCTATAACTCCACGCTGTATGGATTCTTGGCTGTTGCCT TCTTCGTTATAATTTATTACACGGCGTTTGGTGTTATCTCAGTCATCGCACTTGCTCTCAATATATTGTTGCTGGTGGGA TTATTATCGATCATGCAAGCTACGCTGACATTACCCGGGATGGCTGCTTTGGCGCTGACTGTGGGTATGGCTATCGATGC AAATGTGCTGATTAATGAACGTATTCGGGATGAGCTACGCGCTGGCGCTTCTCCGCAGCTCGCCATTCACGCTGGATTTG AACGTGCATTTGGTACGATCTTGGATTCTAATATCACGACCTTAATCGCTGGTATTGCTTTGTTTGCTTTTGGCTCAGGA CCGGTCAAAGGGTTTGCTGTAGTACTTTGCTTGGGTATTTTAACTTCGGTATTTACTGCAACCTTTGTTTCAAGAGGTAT GGTAAATCTGATGTACGGAAGCCGACGTCGACTGGATCACGTTCCCATCGGCAAAATCTGGATACCCAAGCACAGTCTGG ACAGCGGCAAAGTCATTTCTCACGAAGAAGATGAAACAAATGAGGATACAACAGTCAGCGGCAAGGTAAGAATCAACGAG CAGAAGAAAGTAAATCTTCAATCTGAAGTGAGCAGTCCAGTCGAAACGATAGCCGATACTAATAACATTATTGACGATGC AAAAATTAGACCAGATGAGAAAGCTATTACCAAAATCAAAAGTAAGCGTAAAAAATCTGATGTCAAGCAACCTAAACAAT AA Protein sequence : MNRYALWKYLIIAVSLLLGLLYTLPNFYGESPAVQISPLRVSANVDTTLLQRVEDALKKANLETVGILLEADSIKVRFAD TDVQIKAKDLLESSLGKEYIIALNLLPNSPAWLTNLGALPMYLGLDLRGGVHFMLAVDMEGALDKSLDRYSADIRSTLRE HKIPYTGLEKQDKKLILKFRDTEARAKAETELKSNYPDLGLIEKEADNRYHLIAAIKLEAQVRMQDAAVMQNITTLRNRV NELGVAEPIIQKAGADRVIVQLPGVQDTAKAKDILGRTATLEIRMVDDEHDLDAAIRGKIPFGTELYEERGGGPILVKKY VLLTGERITDAQPGFDKDNQPAVHINLDNSGSRIFKQLTRENVGKRMAILLIEKNQTEVVTAPVIREEIGGGRVQISGRM TSREARDVALLLRAGALAAPMDIIEERTVGPSLGAENIARGYNSTLYGFLAVAFFVIIYYTAFGVISVIALALNILLLVG LLSIMQATLTLPGMAALALTVGMAIDANVLINERIRDELRAGASPQLAIHAGFERAFGTILDSNITTLIAGIALFAFGSG PVKGFAVVLCLGILTSVFTATFVSRGMVNLMYGSRRRLDHVPIGKIWIPKHSLDSGKVISHEEDETNEDTTVSGKVRINE QKKVNLQSEVSSPVETIADTNNIIDDAKIRPDEKAITKIKSKRKKSDVKQPKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-101 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-101 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-101 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-101 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-101 | 42 |
