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Name : PPS_3213 (PPS_3213) Accession : YP_004702640.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3617787 - 3619286 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAATATCCTGTACGACGAACGCGTCGATGGCGCGCTGCCCGATGTGGACCAGGGGGCGCTGCTGCAAGCGCTGCGCGC TGCCCTGCCGGACCTCGAGATCCTGCACCGCGAGGAAGACCTCAAGCCCTATGAATGCGACGGCCTCTCGGCCTATCGCA CGGTGCCGCTGCTGGTGGTGCTGCCCGAGCGCCTGGAGCAGGTGCAGGCCCTGCTCAGGCTCTGCCACCAGCGTGGTGTG CCGGTGGTGGCACGCGGCGCCGGTACCGGCCTGTCGGGCGGCGCCCTGCCGCTGGCCAAAGGCATCCTGCTGGTGATGGC GCGTTTCAACCGCATTCTCGAGGTCAACCCGCAAGGCCGCTTCGCCCGTGTGCAGCCCGGCGTGCGCAACCTGGCCATCT CCCAGGCTGCCGCGCCCCACGGCCTGTACTACGCGCCGGACCCATCCTCGCAGATAGCCTGCTCCATCGGCGGCAATGTC GCGGAGAACGCCGGTGGCGTGCACTGCCTGAAGTACGGCCTGACCGTGCACAACCTGCTCAAGGTGGAGATCCTCACGGT CGAGGGCGAACGCCTGACCCTCGGCAGCGATGCCCTGGACAGCCCCGGTTTCGACCTGCTGGCACTGTTCACCGGCTCTG AAGGCATGCTCGGCATCGTCACCGAAGTTACCGTCAAGCTACTGCCCAAGCCCCAGGTGGCGCGAGTGCTGCTGGCCAGC TTCGACAGCGTCGAGGACGCCGGCCGGGCAGTGGCCGAGATCATCGCTGCCGGGATCATCCCCGGCGGCCTGGAGATGAT GGACAACCTCGCGATCCGCGCAGCGGAGGACTTCATCCACGCCGGCTACCCGGTTGACGCTGCGGCCATCCTGCTGTGCG AACTGGATGGCGTCGAAGCCGATGTGCACGATGACTGCGAACGGGTCGCCGACGTGCTGGCCCAGGCCGGTGCGCGTGAT GTGCGGCTGGCCTGCGATGAGGCCGAGCGCGTGCGCTTCTGGGCCGGGCGCAAGAACGCCTTCCCGGCGGTGGGGCGTAG CTCCCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAACTGCCACGGGTGCTCAAGGGCATCAGCGACCTGT CCGCCGAATACGGCCTGCGCGTGGCCAACGTGTTCCATGCCGGCGACGGCAACATGCACCCGCTGATCCTGTTCGATGCC AACCTGCCAGGCGAGCTGGAACGTGCCGAAGCCATCGGCGGCAAAATCCTCGAGCTGTGCGTGGCCGTGGGCGGCAGCAT CACCGGCGAGCACGGCGTGGGGCGCGAGAAGATCAACCAGATGTGCGCACAGTTCAACAGCGACGAAATCACCCTGTTCC ATGCGATCAAGGCTGCCTTCGACCCGCAAGGCCTGCTCAACCCCGGCAAGAACATCCCCACCCTGCACCGCTGCGCCGAA TTCGGCGCCATGCACGTGCACCATGGGCAACTGCCCTTTCCCGAACTGGAGCGCTTCTGA Protein sequence : MNILYDERVDGALPDVDQGALLQALRAALPDLEILHREEDLKPYECDGLSAYRTVPLLVVLPERLEQVQALLRLCHQRGV PVVARGAGTGLSGGALPLAKGILLVMARFNRILEVNPQGRFARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKVEILTVEGERLTLGSDALDSPGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVARVLLAS FDSVEDAGRAVAEIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAAAILLCELDGVEADVHDDCERVADVLAQAGARD VRLACDEAERVRFWAGRKNAFPAVGRSSPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVFHAGDGNMHPLILFDA NLPGELERAEAIGGKILELCVAVGGSITGEHGVGREKINQMCAQFNSDEITLFHAIKAAFDPQGLLNPGKNIPTLHRCAE FGAMHVHHGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 83 |
