Gene Information

Name : PPS_3477 (PPS_3477)
Accession : YP_004702904.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 3918526 - 3919509 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence :
GTGCCTTGGGCTTACAGGAAGGTAAAAGCCTTGGTATCGCTTCGAATCCTTCAGGAAATGGTCATGAGCCTGGACATCCT
CAGAAAATCGCCTCAGATCCCTTCCCTGAAAGCAATTCAGGCCTTCGAGCAAGTTGCTCGCTTCGCCAACGTTGCACGGG
CCGCAGAGCAGTTGAACCTCACACCCTCTGCGGTGAGCCACCAGCTCGCCAATCTGGAAGCCTTGATCGGTCGTCCGTTG
TTCATTCGCGAGGCGCGCGGTGTTGCATTGACCCCGGCCGGAGAGCAGTACCTGCGCGAGGTGTCAGGCATATTGCAAAG
CCTGGCTACGGCCACCGAGCGCGCCGGCAACTCGGTGGGCTTCGATTGCTTGCGGCTTCATTCCGCGCCCAGCTTCGGCC
TGCTCTGGTTGCTGCCGCGCCTGGACCATTTTCGTAACAGTCATCCGCAGATCCAGATCAACCTGTCGTGCTCCTACGAG
TCTCTGCACTTCGGCCGCCATCAGATCGATCTGGATATCCGTCATGGCTACCCCAACTGGCCCAGCCTGGAAGTGCGTAC
CATCCGGCATGAACGTGCAACTGTGCTGGCCTCGCCACAGCTTCTCGAGCGTACGCCTATCAAGCAGCCGGGCGATCTGC
TGGGGCAGAACCTGATCCTGTCGGAAGCCGCATTGGTGCAGTGGCCCCAATGGTTCGCCCAGCAAGGCGTGACGTTGCCT
CAAACCCCCTACGCCTTGAGCTTCGATCGCTCCTACATGAGCCTGGAGGCCGCCAGCCACGGGTATGGGGTGGCCTTGGA
GAGTTCCCTGCTGGCGCAGGACTATATCGCCCGGGGCGAGTTGGTACCGGTATTTGCGGAAGACTTGGCGACGCCCGTCA
GTGCCCACCACCTGGTATTTCCTCGAGGCCATGCTGAAACCCCCAGGGTTCGACAGTTCCTTGAATGGATGCAGGGCCAG
CTCGGTCATGACTTCAATTACTGA

Protein sequence :
MPWAYRKVKALVSLRILQEMVMSLDILRKSPQIPSLKAIQAFEQVARFANVARAAEQLNLTPSAVSHQLANLEALIGRPL
FIREARGVALTPAGEQYLREVSGILQSLATATERAGNSVGFDCLRLHSAPSFGLLWLLPRLDHFRNSHPQIQINLSCSYE
SLHFGRHQIDLDIRHGYPNWPSLEVRTIRHERATVLASPQLLERTPIKQPGDLLGQNLILSEAALVQWPQWFAQQGVTLP
QTPYALSFDRSYMSLEAASHGYGVALESSLLAQDYIARGELVPVFAEDLATPVSAHHLVFPRGHAETPRVRQFLEWMQGQ
LGHDFNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-103 69
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-103 69
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-103 69
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-102 69
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 3e-103 69