Gene Information

Name : PPS_3539 (PPS_3539)
Accession : YP_004702964.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 3981574 - 3982020 bp
Length : 447 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGAAAGCGTCGAGATGTTTACCGATGGTGCCTGCAAGGGCAACCCTGGCCCTGGCGGCTGGGGCGTCCTTATGAT
CTACAAGGGCGTCGAGAAGGAACTGTGGGGCGGCGAACGCGAAACCACCAACAACCGCATGGAACTGATGGCCGCGATCC
AGGGCTTGATGGCGCTGAAGCGCGAATGCGAAGTGGTGCTGACCACCGACTCGCAGTACGTGATGAAGGGCATCAACGAA
TGGATGACCAACTGGAAGAAGCGCGGCTGGAAAACCGCGGCCAAGGAGCCGGTGAAGAACGCCGACCTGTGGCAGCAGCT
GGATGAGCAGGTCAACCGCCACAAGGTGACCTGGAAGTGGGTGCGCGGGCATATCGGCCACCCCGGCAACGAACGCGCCG
ACCAGCTGGCCAACCGTGGGGTCGATGAAGTGCGCGCCAAGCGTTGA

Protein sequence :
MSESVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMALKRECEVVLTTDSQYVMKGINE
WMTNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGHIGHPGNERADQLANRGVDEVRAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-39 60