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Name : PPS_3724 (PPS_3724) Accession : YP_004703145.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4203977 - 4205965 bp Length : 1989 bp Strand : - Note : - DNA sequence : ATGAACGCGGCGCTGGTGATCCCCGAACTCGGCCAGCTGGCGATGATCCTGGCCATCTGCTTTGCTGCCGTGCAGGCCAG CGTGCCGCTGCTCGGCGCCTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGGCCGGCGGCCTGGGGGCAGTTCGCCT TCCTGGCCTTTGCCTTCGCCTGCCTGACCCATGCCTTCATGACCGACAACTTCTCGGTCGCCTATGTGGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCCGTGTGGGGGGCGCACGAAGGTTCGCTGTTGCTGTGGGCGCTGAT CCTCGGCGGCTGGACCTTCGCCGTATCGGTGTTCTCGCGGCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTAA TGGGCATGATCAGCGTGGGCTTCCTGAGCTTCCTGATCATCACCTCCAACCCGTTCCAGCGCCTGCTGCCGCAGGTGCCG ACCGATGGCCGCGACCTCAACCCGCTGTTGCAGGACTTTGGCCTGATCGTCCACCCGCCGATGCTGTACATGGGCTACGT CGGGTTCTCGGTGGCCTTCGCCTTCGCCATCGCCGCCTTGCTCGGTGGCCGCCTGGACGCCGCCTGGGCGCGCTGGTCGC GGCCCTGGACCATCGTTGCCTGGGCCTTCCTCGGTGTCGGCATTACCCTGGGTTCGTGGTGGGCCTACTATGAACTGGGC TGGGGTGGCTGGTGGTTCTGGGACCCTGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGTACGGCGCTGATCCACTC GCTGGCGGTGACCGAGAAGCGCGGGGTATTCAAGAGCTGGACCGTGCTGCTGGCGATTGCCGCGTTCTCGCTGAGCCTGC TGGGTACCTTCCTGGTGCGCTCCGGTGTCCTGACCTCGGTGCATGCGTTTGCCGCCGACCCGTCGCGGGGCATTTTCATC CTGATCTTCCTGCTGTTCGTGGTCGGTGGTTCGCTCACTCTGTTCGCCTTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG CTTTGCCCTGTGGTCGCGCGAGACGCTGCTGCTGGCCAACAACCTGGTGCTGGTAGTGGCGGCCTCGATGATTCTGCTCG GCACCCTCTACCCGCTGGTGCTCGATGCGTTGACCGGTGCCAAGCTGTCGGTCGGCCCACCGTATTTCGACGCCTTGTTC CTGCCGCTGATGGCACTGCTGATGGTGGTGCTGGGCGTGGGCGTGGTGGTGCGCTGGAAAGACACCCCCGGCAAATGGCT GGCCAGCATGATGACCCCGGTGCTGCTCGGCAGCGCCATCCTCGCGCCGGTGGCAGGCTTTATCGTCGACGACTTCGACT GGCCGACCCTGACCGCCTTCGCCCTGGCCGCCTGGGTGGTGCTTGGCGGGCTGCGCGACATTCTCGACAAGACCCGTCAC AAAGGCCTGCTCAAGGGCCTGCCTGGCCTGGGTCGCAGCTACTGGGGCATGCAGCTGGCGCACCTGGGCCTGGCGGTGTG CGCGCTGGGCGTGGTGCTGTCGAGCAACAACAGCGCCGAACGCGACCTGCGCATGGCACCGGGCGAGAGCGTGGAGCTGG GCGGTTACCACTTCCTGTTCCAGGGGGCCCGGCACTTCGAAGGGCCGAACTTCATCTCCGACAAGGGCACCGTGGTGGTC AGCCGCGATGGCCGTGAAGTGACCACCCTGCACCCGGAGAAGCGCCTGTACACCGTGCAGCAGTCGATGATGACCGAAGC CGGCATCGACGCCGGCTTTACCCGCGACCTGTACGTCGCCCTCGGCGAGCCGCTGGAGAACGGCGCCTGGGCAGTACGTG TGCATATCAAGCCTTACGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGAC CGGCGCTATCGCGTCAAGGTCAAGACCCGGGTGCGTGATGCCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVIPELGQLAMILAICFAAVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LIFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVLGVGVVVRWKDTPGKWLASMMTPVLLGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRH KGLLKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGARHFEGPNFISDKGTVVV SRDGREVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDALGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-116 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-112 | 57 |
